RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 ALDH1A1P00352 501 aa12□□□□□ -0.49
TNC-201ENST00000341037 GFAPP14136 432 aa12□□□□□ -0.49
TNC-201ENST00000341037 AKT1P31749 480 aa12□□□□□ -0.49
TNC-201ENST00000341037 COG2Q14746 738 aa12□□□□□ -0.49
TNC-201ENST00000341037 R3HDM1Q15032 1099 aaKnown RBP12□□□□□ -0.49
TNC-201ENST00000341037 TTC39CQ8N584 583 aa12□□□□□ -0.49
TNC-201ENST00000341037 NEDD1Q8NHV4 660 aa12□□□□□ -0.49
TNC-201ENST00000341037 RFFLQ8WZ73 363 aa12□□□□□ -0.49
TNC-201ENST00000341037 FAM96AQ9H5X1 160 aa12□□□□□ -0.49
TNC-201ENST00000341037 HPS4Q9NQG7 708 aa12□□□□□ -0.49
TNC-201ENST00000341037 PRRG1O14668 218 aa12□□□□□ -0.49
TNC-201ENST00000341037 HIF1AQ16665 826 aa12□□□□□ -0.49
TNC-201ENST00000341037 C16orf87Q6PH81 154 aa12□□□□□ -0.49
TNC-201ENST00000341037 SLC35G2Q8TBE7 412 aa12□□□□□ -0.49
TNC-201ENST00000341037 ASAP3Q8TDY4 903 aa12□□□□□ -0.49
TNC-201ENST00000341037 LRRC37BQ96QE4 947 aa12□□□□□ -0.49
TNC-201ENST00000341037 HACL1Q9UJ83 578 aa12□□□□□ -0.49
TNC-201ENST00000341037 ZNRF3Q9ULT6 936 aa12□□□□□ -0.49
TNC-201ENST00000341037 PLA2R1Q13018 1463 aa12□□□□□ -0.49
TNC-201ENST00000341037 SPHKAPQ2M3C7 1700 aa12□□□□□ -0.49
TNC-201ENST00000341037 RCAN1P53805 252 aa12□□□□□ -0.49
TNC-201ENST00000341037 EMC2Q15006 297 aa12□□□□□ -0.49
TNC-201ENST00000341037 P3H1Q32P28 736 aa12□□□□□ -0.49
TNC-201ENST00000341037 FAM118BQ9BPY3 351 aa12□□□□□ -0.49
TNC-201ENST00000341037 ZNF70Q9UC06 446 aaPredicted RBP12□□□□□ -0.49
TNC-201ENST00000341037 ANO9A1A5B4 782 aa12□□□□□ -0.49
TNC-201ENST00000341037 PSMD14O00487 310 aa12□□□□□ -0.49
TNC-201ENST00000341037 GH1P01241 217 aa12□□□□□ -0.49
TNC-201ENST00000341037 ST8SIA6P61647 398 aa12□□□□□ -0.49
TNC-201ENST00000341037 SNAPC2Q13487 334 aa12□□□□□ -0.49
TNC-201ENST00000341037 ZNF280CQ8ND82 737 aa12□□□□□ -0.49
TNC-201ENST00000341037 MRPL40Q9NQ50 206 aaKnown RBP12□□□□□ -0.49
TNC-201ENST00000341037 AMACRQ9UHK6 382 aa12□□□□□ -0.49
TNC-201ENST00000341037 EEF2KO00418 725 aaKnown RBP12□□□□□ -0.49
TNC-201ENST00000341037 CDC42EP5Q6NZY7 148 aa12□□□□□ -0.49
TNC-201ENST00000341037 TADA2BQ86TJ2 420 aa12□□□□□ -0.49
TNC-201ENST00000341037 GUF1Q8N442 669 aaKnown RBP12□□□□□ -0.49
TNC-201ENST00000341037 TSSK1BQ9BXA7 367 aa12□□□□□ -0.49
TNC-201ENST00000341037 TMEM117Q9H0C3 514 aa12□□□□□ -0.49
TNC-201ENST00000341037 FBXO2Q9UK22 296 aaPredicted RBP12□□□□□ -0.49
TNC-201ENST00000341037 RFX7Q2KHR2 1363 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 HMOX2P30519 316 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 AP2B1P63010 937 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 MTF1Q14872 753 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 MGAT5BQ3V5L5 792 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 B4GALNT2Q8NHY0 566 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 WDR48Q8TAF3 677 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 ABHD8Q96I13 439 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 KATNAL1Q9BW62 490 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 GGT7Q9UJ14 662 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 FAM187AA6NFU0 413 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 ETFBP38117 255 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 ERFP50548 548 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 CCDC85BQ15834 202 aaPredicted RBP11.99□□□□□ -0.49
TNC-201ENST00000341037 RNPC3Q96LT9 517 aaKnown RBP11.99□□□□□ -0.49
TNC-201ENST00000341037 KDM4CQ9H3R0 1056 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 NOP53Q9NZM5 478 aaKnown RBP11.99□□□□□ -0.49
TNC-201ENST00000341037 XPO7Q9UIA9 1087 aaKnown RBP11.99□□□□□ -0.49
TNC-201ENST00000341037 LSM7Q9UK45 103 aaKnown RBP11.99□□□□□ -0.49
TNC-201ENST00000341037 AURKCQ9UQB9 309 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 GMNCA6NCL1 334 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 SLC16A3O15427 465 aaKnown RBP11.99□□□□□ -0.49
TNC-201ENST00000341037 ARIH2O95376 493 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 SOX11P35716 441 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 TMED8Q6PL24 325 aaPredicted RBP11.99□□□□□ -0.49
TNC-201ENST00000341037 ATG9AQ7Z3C6 839 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 NLRP14Q86W24 1093 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 LRRC71Q8N4P6 559 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 LINC00116Q8NCU8 138 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 C18orf8Q96DM3 657 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 SMARCAD1Q9H4L7 1026 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 SPATS2LQ9NUQ6 558 aaKnown RBP11.99□□□□□ -0.49
TNC-201ENST00000341037 FAM49BQ9NUQ9 324 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 MTMR4Q9NYA4 1195 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 TRPM1Q7Z4N2 1603 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 PNPLA7Q6ZV29 1317 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 SEC24DO94855 1032 aaPredicted RBP11.99□□□□□ -0.49
TNC-201ENST00000341037 ITGA4P13612 1032 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 RBP5P82980 135 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 DEUP1Q05D60 604 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 NCOA4Q13772 614 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 KRT72Q14CN4 511 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 PKN3Q6P5Z2 889 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 MMS22LQ6ZRQ5 1243 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 STOX1Q6ZVD7 989 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 SNX31Q8N9S9 440 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 UBA3Q8TBC4 463 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 SRPK1Q96SB4 655 aaKnown RBP11.99□□□□□ -0.49
TNC-201ENST00000341037 TRAPPC3O43617 180 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 RPS6KA5O75582 802 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 NLRP11P59045 1033 aaKnown RBP11.99□□□□□ -0.49
TNC-201ENST00000341037 GOLGA7BQ2TAP0 167 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 RCOR2Q8IZ40 523 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 PABPC5Q96DU9 382 aaKnown RBP11.99□□□□□ -0.49
TNC-201ENST00000341037 ZFYVE28Q9HCC9 887 aa11.99□□□□□ -0.49
TNC-201ENST00000341037 PJA2O43164 708 aa11.98□□□□□ -0.49
TNC-201ENST00000341037 ENO1P06733 434 aaKnown RBP11.98□□□□□ -0.49
TNC-201ENST00000341037 OR1G1P47890 313 aa11.98□□□□□ -0.49
TNC-201ENST00000341037 E2F4Q16254 413 aa11.98□□□□□ -0.49
TNC-201ENST00000341037 NUDT18Q6ZVK8 323 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms