RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 ANKRD20A3Q5VUR7 823 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 KIRREL3Q8IZU9 778 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 SPICE1Q8N0Z3 855 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 PLEKHO2Q8TD55 490 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 FAM81BQ96LP2 452 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 TMEM237Q96Q45 408 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 EHMT1Q9H9B1 1298 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 UBN1Q9NPG3 1134 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 HSPBP1Q9NZL4 362 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 STK38LQ9Y2H1 464 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 ZNF646O15015 1829 aaPredicted RBP22.05■■□□□ 1.12
CLPB-202ENST00000340729 GOLGB1Q14789 3259 aaKnown RBP22.05■■□□□ 1.12
CLPB-202ENST00000340729 PTP4A2Q12974 167 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 SPDYAQ5MJ70 313 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 CYP4X1Q8N118 509 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 AGGF1Q8N302 714 aaeCLIP22.05■■□□□ 1.121e-6■■■■□ 20.3
CLPB-202ENST00000340729 PCIF1Q9H4Z3 704 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 AVENQ9NQS1 362 aaPredicted RBP22.05■■□□□ 1.12
CLPB-202ENST00000340729 PRR12Q9ULL5 1215 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 CORO1CQ9ULV4 474 aaPredicted RBP22.05■■□□□ 1.12
CLPB-202ENST00000340729 COQ4Q9Y3A0 265 aa22.05■■□□□ 1.12
CLPB-202ENST00000340729 ZNFX1Q9P2E3 1918 aaKnown RBP22.05■■□□□ 1.12
CLPB-202ENST00000340729 SLX4Q8IY92 1834 aa22.04■■□□□ 1.12
CLPB-202ENST00000340729 DDTLA6NHG4 134 aaPredicted RBP22.04■■□□□ 1.12
CLPB-202ENST00000340729 CRKP46108 304 aa22.04■■□□□ 1.12
CLPB-202ENST00000340729 GRIK3Q13003 919 aa22.04■■□□□ 1.12
CLPB-202ENST00000340729 BLMHQ13867 455 aa22.04■■□□□ 1.12
CLPB-202ENST00000340729 CMPK2Q5EBM0 449 aa22.04■■□□□ 1.12
CLPB-202ENST00000340729 LARGE2Q8N3Y3 721 aa22.04■■□□□ 1.12
CLPB-202ENST00000340729 DDX1Q92499 740 aaKnown RBP22.04■■□□□ 1.12
CLPB-202ENST00000340729 INPP5DQ92835 1189 aa22.04■■□□□ 1.12
CLPB-202ENST00000340729 CBWD1Q9BRT8 395 aa22.04■■□□□ 1.12
CLPB-202ENST00000340729 TEKT3Q9BXF9 490 aa22.04■■□□□ 1.12
CLPB-202ENST00000340729 PITPNM3Q9BZ71 974 aa22.04■■□□□ 1.12
CLPB-202ENST00000340729 MLXIPLQ9NP71 852 aa22.04■■□□□ 1.12
CLPB-202ENST00000340729 FAM47DPA6NHR8 397 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 CETPP11597 493 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 HMGB2P26583 209 aaKnown RBP22.03■■□□□ 1.12
CLPB-202ENST00000340729 POLGP54098 1239 aaPredicted RBP22.03■■□□□ 1.12
CLPB-202ENST00000340729 ABCB5Q2M3G0 1257 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 PADI6Q6TGC4 694 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 SLC30A10Q6XR72 485 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 KIFAP3Q92845 792 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 SCN9AQ15858 1988 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 FAM196BA6NMK8 535 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 GRIN3BO60391 1043 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 POLR2MP0CAP2 368 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 TAL1P17542 331 aaPredicted RBP22.03■■□□□ 1.12
CLPB-202ENST00000340729 FOXN2P32314 431 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 GTF2BQ00403 316 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 DOK7Q18PE1 504 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 TMEM63BQ5T3F8 832 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 CDCA2Q69YH5 1023 aaPredicted RBP22.03■■□□□ 1.12
CLPB-202ENST00000340729 PPM1KQ8N3J5 372 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 CCDC89Q8N998 374 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 MAML1Q92585 1016 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 ZNF622Q969S3 477 aaKnown RBP eCLIP22.03■■□□□ 1.12
CLPB-202ENST00000340729 UTP4Q969X6 686 aaKnown RBP22.03■■□□□ 1.12
CLPB-202ENST00000340729 RIT2Q99578 217 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 ZNF577Q9BSK1 485 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 ZC3H12CQ9C0D7 883 aaKnown RBP22.03■■□□□ 1.12
CLPB-202ENST00000340729 ETNK1Q9HBU6 452 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 TRIM33Q9UPN9 1127 aa22.03■■□□□ 1.12
CLPB-202ENST00000340729 KIF3CO14782 793 aa22.02■■□□□ 1.12
CLPB-202ENST00000340729 ECM2O94769 699 aaPredicted RBP22.02■■□□□ 1.12
CLPB-202ENST00000340729 VIL1P09327 827 aaKnown RBP22.02■■□□□ 1.12
CLPB-202ENST00000340729 GPC3P51654 580 aa22.02■■□□□ 1.12
CLPB-202ENST00000340729 SNX1Q13596 522 aa22.02■■□□□ 1.12
CLPB-202ENST00000340729 SETDB1Q15047 1291 aa22.02■■□□□ 1.12
CLPB-202ENST00000340729 CLEC16AQ2KHT3 1053 aa22.02■■□□□ 1.12
CLPB-202ENST00000340729 SRRM1Q8IYB3 904 aaKnown RBP22.02■■□□□ 1.12
CLPB-202ENST00000340729 TEX9Q8N6V9 391 aa22.02■■□□□ 1.12
CLPB-202ENST00000340729 HELQQ8TDG4 1101 aa22.02■■□□□ 1.12
CLPB-202ENST00000340729 IWS1Q96ST2 819 aa22.02■■□□□ 1.12
CLPB-202ENST00000340729 RPL26L1Q9UNX3 145 aaKnown RBP22.02■■□□□ 1.12
CLPB-202ENST00000340729 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.02■■□□□ 1.12
CLPB-202ENST00000340729 USH1CQ9Y6N9 552 aa22.02■■□□□ 1.12
CLPB-202ENST00000340729 ATRNL1Q5VV63 1379 aa22.02■■□□□ 1.12
CLPB-202ENST00000340729 ASMTLO95671 621 aa22.02■■□□□ 1.11
CLPB-202ENST00000340729 PLS3P13797 630 aa22.02■■□□□ 1.11
CLPB-202ENST00000340729 GNAZP19086 355 aa22.02■■□□□ 1.11
CLPB-202ENST00000340729 MAPK4P31152 587 aa22.02■■□□□ 1.11
CLPB-202ENST00000340729 ADCY8P40145 1251 aa22.02■■□□□ 1.11
CLPB-202ENST00000340729 SATB1Q01826 763 aa22.02■■□□□ 1.11
CLPB-202ENST00000340729 KLF1Q13351 362 aaPredicted RBP22.02■■□□□ 1.11
CLPB-202ENST00000340729 CCNG2Q16589 344 aa22.02■■□□□ 1.11
CLPB-202ENST00000340729 MIS18BP1Q6P0N0 1132 aa22.02■■□□□ 1.11
CLPB-202ENST00000340729 SH3BP5LQ7L8J4 393 aa22.02■■□□□ 1.11
CLPB-202ENST00000340729 TDRPQ86YL5 185 aa22.02■■□□□ 1.11
CLPB-202ENST00000340729 SH3TC2Q8TF17 1288 aa22.02■■□□□ 1.11
CLPB-202ENST00000340729 FAM198AQ9UFP1 575 aa22.02■■□□□ 1.11
CLPB-202ENST00000340729 PRPF4O43172 522 aaKnown RBP eCLIP22.01■■□□□ 1.11
CLPB-202ENST00000340729 WDR4P57081 412 aaKnown RBP22.01■■□□□ 1.11
CLPB-202ENST00000340729 KRT39Q6A163 491 aa22.01■■□□□ 1.11
CLPB-202ENST00000340729 NSMFQ6X4W1 530 aa22.01■■□□□ 1.11
CLPB-202ENST00000340729 FLAD1Q8NFF5 587 aa22.01■■□□□ 1.11
CLPB-202ENST00000340729 ATG4AQ8WYN0 398 aa22.01■■□□□ 1.11
CLPB-202ENST00000340729 DDX27Q96GQ7 796 aaKnown RBP22.01■■□□□ 1.11
CLPB-202ENST00000340729 MASTLQ96GX5 879 aa22.01■■□□□ 1.11
CLPB-202ENST00000340729 RNPEPL1Q9HAU8 725 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms