RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 MYLK2Q9H1R3 596 aa17.19■□□□□ 0.34
SCARB1-202ENST00000339570 NOCTQ9UK39 431 aaKnown RBP17.19■□□□□ 0.34
SCARB1-202ENST00000339570 KAT6AQ92794 2004 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 GAS8O95995 478 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 NEFHP12036 1026 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 MFAP3P55082 362 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 UGCGQ16739 394 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 CRY2Q49AN0 593 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 ACCSQ96QU6 501 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 ZNF148Q9UQR1 794 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 ALAS1P13196 640 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 ZNF131P52739 623 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 CGB2Q6NT52 195 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 PRMT6Q96LA8 375 aaPredicted RBP17.18■□□□□ 0.34
SCARB1-202ENST00000339570 RBM15Q96T37 977 aaKnown RBP eCLIP17.18■□□□□ 0.344e-7■■■□□ 17.1
SCARB1-202ENST00000339570 FAM213AQ9BRX8 229 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 SAE1Q9UBE0 346 aaPredicted RBP17.18■□□□□ 0.34
SCARB1-202ENST00000339570 ITGB5P18084 799 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 HOXA7P31268 230 aaPredicted RBP17.18■□□□□ 0.34
SCARB1-202ENST00000339570 C15orf52Q6ZUT6 534 aaKnown RBP17.18■□□□□ 0.34
SCARB1-202ENST00000339570 BZW1Q7L1Q6 419 aaKnown RBP17.18■□□□□ 0.34
SCARB1-202ENST00000339570 P3H4Q92791 437 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 NT5C1BQ96P26 610 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 FHDC1Q9C0D6 1143 aaPredicted RBP17.18■□□□□ 0.34
SCARB1-202ENST00000339570 KCNH7Q9NS40 1196 aa17.18■□□□□ 0.34
SCARB1-202ENST00000339570 CNOT7Q9UIV1 285 aaKnown RBP17.18■□□□□ 0.34
SCARB1-202ENST00000339570 ADAMTSL1Q8N6G6 1762 aa17.17■□□□□ 0.34
SCARB1-202ENST00000339570 SBF2Q86WG5 1849 aa17.17■□□□□ 0.34
SCARB1-202ENST00000339570 TESPA1A2RU30 521 aaPredicted RBP17.17■□□□□ 0.34
SCARB1-202ENST00000339570 NFIBO00712 420 aa17.17■□□□□ 0.34
SCARB1-202ENST00000339570 TCF4P15884 667 aa17.17■□□□□ 0.34
SCARB1-202ENST00000339570 CA4P22748 312 aa17.17■□□□□ 0.34
SCARB1-202ENST00000339570 MOXD1Q6UVY6 613 aa17.17■□□□□ 0.34
SCARB1-202ENST00000339570 ADAM22Q9P0K1 906 aa17.17■□□□□ 0.34
SCARB1-202ENST00000339570 TP73O15350 636 aa17.17■□□□□ 0.34
SCARB1-202ENST00000339570 PCK1P35558 622 aa17.17■□□□□ 0.34
SCARB1-202ENST00000339570 IFT74Q96LB3 600 aa17.17■□□□□ 0.34
SCARB1-202ENST00000339570 HSPA6P17066 643 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 TNNI1P19237 187 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 CCNHP51946 323 aaPredicted RBP17.16■□□□□ 0.34
SCARB1-202ENST00000339570 DRG2P55039 364 aaKnown RBP17.16■□□□□ 0.34
SCARB1-202ENST00000339570 PKN2Q16513 984 aaKnown RBP17.16■□□□□ 0.34
SCARB1-202ENST00000339570 EAPPQ56P03 285 aaPredicted RBP17.16■□□□□ 0.34
SCARB1-202ENST00000339570 TLDC1Q6P9B6 456 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 CKAP2Q8WWK9 683 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 USP21Q9UK80 565 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 DENND3A2RUS2 1198 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 ATP2A2P16615 1042 aaKnown RBP17.16■□□□□ 0.34
SCARB1-202ENST00000339570 EPHB2P29323 1055 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 CIITAP33076 1130 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 TAS2R40P59535 323 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 ANKRD20A2Q5SQ80 823 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 ANKRD20A1Q5TYW2 823 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 ANKRD20A3Q5VUR7 823 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 ANKS1BQ7Z6G8 1248 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 RPS6KC1Q96S38 1066 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 NPHS2Q9NP85 383 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 COL16A1Q07092 1604 aaPredicted RBP17.16■□□□□ 0.34
SCARB1-202ENST00000339570 CFAP73A6NFT4 308 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 C21orf2O43822 256 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 RAD23BP54727 409 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 AOC3Q16853 763 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 TRMT10CQ7L0Y3 403 aaKnown RBP17.16■□□□□ 0.34
SCARB1-202ENST00000339570 CYFIP1Q7L576 1253 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 LDHDQ86WU2 507 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 TTC8Q8TAM2 541 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 FBF1Q8TES7 1133 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 CCPG1Q9ULG6 757 aa17.16■□□□□ 0.34
SCARB1-202ENST00000339570 A0A1W2PPM1 405 aa17.15■□□□□ 0.34
SCARB1-202ENST00000339570 HNRNPDLO14979 420 aaKnown RBP17.15■□□□□ 0.34
SCARB1-202ENST00000339570 PLS3P13797 630 aa17.15■□□□□ 0.34
SCARB1-202ENST00000339570 WDR4P57081 412 aaKnown RBP17.15■□□□□ 0.34
SCARB1-202ENST00000339570 BNIP1Q12981 228 aa17.15■□□□□ 0.34
SCARB1-202ENST00000339570 SETDB1Q15047 1291 aa17.15■□□□□ 0.34
SCARB1-202ENST00000339570 FAM71AQ8IYT1 594 aa17.15■□□□□ 0.34
SCARB1-202ENST00000339570 CD101Q93033 1021 aa17.15■□□□□ 0.34
SCARB1-202ENST00000339570 METTL5Q9NRN9 209 aaKnown RBP17.15■□□□□ 0.34
SCARB1-202ENST00000339570 ENTPD5O75356 428 aa17.15■□□□□ 0.34
SCARB1-202ENST00000339570 GSTA1P08263 222 aa17.15■□□□□ 0.34
SCARB1-202ENST00000339570 ACOT2P49753 483 aa17.15■□□□□ 0.34
SCARB1-202ENST00000339570 SEPT7Q16181 437 aaKnown RBP17.15■□□□□ 0.34
SCARB1-202ENST00000339570 ARHGEF18Q6ZSZ5 1173 aa17.15■□□□□ 0.34
SCARB1-202ENST00000339570 SP8Q8IXZ3 490 aa17.15■□□□□ 0.34
SCARB1-202ENST00000339570 ZBED8Q8IZ13 594 aa17.15■□□□□ 0.34
SCARB1-202ENST00000339570 PLVAPQ9BX97 442 aa17.15■□□□□ 0.34
SCARB1-202ENST00000339570 KIAA1683Q9H0B3 1180 aa17.15■□□□□ 0.34
SCARB1-202ENST00000339570 SUGT1Q9Y2Z0 365 aa17.15■□□□□ 0.34
SCARB1-202ENST00000339570 C2orf71A6NGG8 1288 aa17.14■□□□□ 0.34
SCARB1-202ENST00000339570 TAC1P20366 129 aa17.14■□□□□ 0.34
SCARB1-202ENST00000339570 CNGA1P29973 690 aa17.14■□□□□ 0.34
SCARB1-202ENST00000339570 YWHABP31946 246 aaKnown RBP17.14■□□□□ 0.34
SCARB1-202ENST00000339570 NSFP46459 744 aaKnown RBP17.14■□□□□ 0.34
SCARB1-202ENST00000339570 PSEN1P49768 467 aa17.14■□□□□ 0.34
SCARB1-202ENST00000339570 GAD2Q05329 585 aa17.14■□□□□ 0.34
SCARB1-202ENST00000339570 EFTUD2Q15029 972 aaKnown RBP eCLIP17.14■□□□□ 0.344e-7■■■■□ 26.1
SCARB1-202ENST00000339570 SV2AQ7L0J3 742 aa17.14■□□□□ 0.34
SCARB1-202ENST00000339570 SERPINB12Q96P63 405 aa17.14■□□□□ 0.34
SCARB1-202ENST00000339570 DCLK3Q9C098 648 aa17.14■□□□□ 0.34
SCARB1-202ENST00000339570 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.14■□□□□ 0.341e-6■■■■■ 29.1
SCARB1-202ENST00000339570 COL20A1Q9P218 1284 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms