RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 PALB2Q86YC2 1186 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 EPS8L1Q8TE68 723 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 PRPF31Q8WWY3 499 aaKnown RBP11.92□□□□□ -0.5
LRP1-202ENST00000338962 PSPC1Q8WXF1 523 aaKnown RBP11.92□□□□□ -0.5
LRP1-202ENST00000338962 SHC3Q92529 594 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.92□□□□□ -0.51e-8■■■■■ 33.6
LRP1-202ENST00000338962 UNC93B1Q9H1C4 597 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 NCANO14594 1321 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 GAS2O43903 313 aaKnown RBP11.92□□□□□ -0.5
LRP1-202ENST00000338962 KIF4AO95239 1232 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 LDHAP00338 332 aaKnown RBP11.92□□□□□ -0.5
LRP1-202ENST00000338962 GH1P01241 217 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 RARBP10826 455 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 CCL5P13501 91 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 ACOT2P49753 483 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 GJA9P57773 515 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 PRPF4BQ13523 1007 aaKnown RBP11.92□□□□□ -0.5
LRP1-202ENST00000338962 PSMD6Q15008 389 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 PLPPR4Q7Z2D5 763 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 EXOC8Q8IYI6 725 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 RPUSD2Q8IZ73 545 aaKnown RBP11.92□□□□□ -0.5
LRP1-202ENST00000338962 SLC35G2Q8TBE7 412 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 HELQQ8TDG4 1101 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 ATP8B4Q8TF62 1192 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 TCP11Q8WWU5 503 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 COPS5Q92905 334 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 MSTO1Q9BUK6 570 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 TARS2Q9BW92 718 aaKnown RBP11.92□□□□□ -0.5
LRP1-202ENST00000338962 UPF3AQ9H1J1 476 aaKnown RBP11.92□□□□□ -0.5
LRP1-202ENST00000338962 TMEM134Q9H6X4 195 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 SUGCTQ9HAC7 445 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 C1orf112Q9NSG2 853 aa11.92□□□□□ -0.5
LRP1-202ENST00000338962 RBAKQ9NYW8 714 aaPredicted RBP11.92□□□□□ -0.5
LRP1-202ENST00000338962 CES2O00748 559 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 CYP26A1O43174 497 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 ZC3H11AO75152 810 aaKnown RBP eCLIP11.91□□□□□ -0.5
LRP1-202ENST00000338962 LGR5O75473 907 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 SLC26A2P50443 739 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 PDE6CP51160 858 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 EFNA5P52803 228 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 CLDN10P78369 228 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 DRP2Q13474 957 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 GJC2Q5T442 439 aaPredicted RBP11.91□□□□□ -0.5
LRP1-202ENST00000338962 C8orf74Q6P047 294 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 ENOSF1Q7L5Y1 443 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 SLFN11Q7Z7L1 901 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 TLK2Q86UE8 772 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 SLC47A2Q86VL8 602 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 FAM81BQ96LP2 452 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 THAP2Q9H0W7 228 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 RNF208Q9H0X6 261 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 OSGEPQ9NPF4 335 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 RBM12Q9NTZ6 932 aaKnown RBP11.91□□□□□ -0.5
LRP1-202ENST00000338962 TAS2R14Q9NYV8 317 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 L1RE1Q9UN81 338 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 A6NJR5 290 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 DYNC1LI2O43237 492 aaPredicted RBP11.91□□□□□ -0.5
LRP1-202ENST00000338962 ADAMTS4O75173 837 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 ZMYND10O75800 440 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 SGPL1O95470 568 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 GJB1P08034 283 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 HOXD8P13378 290 aaPredicted RBP11.91□□□□□ -0.5
LRP1-202ENST00000338962 CAPN2P17655 700 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 PLA2G4AP47712 749 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 GCNT1Q02742 428 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 BIRC3Q13489 604 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 MXD4Q14582 209 aaPredicted RBP11.91□□□□□ -0.5
LRP1-202ENST00000338962 PTPROQ16827 1216 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 IER5Q5VY09 327 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 RHOT2Q8IXI1 618 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 KLHDC9Q8NEP7 349 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 PPTC7Q8NI37 304 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 RUBCNQ92622 972 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 ZBTB45Q96K62 511 aaPredicted RBP11.91□□□□□ -0.5
LRP1-202ENST00000338962 LRRC1Q9BTT6 524 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 PDE11AQ9HCR9 933 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 CALCOCO1Q9P1Z2 691 aa11.91□□□□□ -0.5
LRP1-202ENST00000338962 NOCTQ9UK39 431 aaKnown RBP11.91□□□□□ -0.5
LRP1-202ENST00000338962 A0A0B4J269 797 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 FAM170AA1A519 330 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 MAP2K7O14733 419 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 CLDN3O15551 220 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 BUB1BO60566 1050 aaPredicted RBP11.9□□□□□ -0.5
LRP1-202ENST00000338962 FTLP02792 175 aaPredicted RBP11.9□□□□□ -0.5
LRP1-202ENST00000338962 CYP11B1P15538 503 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 CST5P28325 142 aaPredicted RBP11.9□□□□□ -0.5
LRP1-202ENST00000338962 PIK3CAP42336 1068 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 GPS2Q13227 327 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 ZACNQ401N2 412 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 WDR44Q5JSH3 913 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 LMBRD2Q68DH5 695 aaPredicted RBP11.9□□□□□ -0.5
LRP1-202ENST00000338962 ZPBP2Q6X784 338 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 C15orf39Q6ZRI6 1047 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 NOP9Q86U38 636 aaKnown RBP11.9□□□□□ -0.5
LRP1-202ENST00000338962 LENG1Q96BZ8 264 aaPredicted RBP11.9□□□□□ -0.5
LRP1-202ENST00000338962 PBKQ96KB5 322 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 JPH2Q9BR39 696 aaPredicted RBP11.9□□□□□ -0.5
LRP1-202ENST00000338962 PI4K2AQ9BTU6 479 aa11.9□□□□□ -0.5
LRP1-202ENST00000338962 SELENOOQ9BVL4 669 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms