RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 TRAIPQ9BWF2 469 aa21.69■■□□□ 1.06
RUNX3-202ENST00000338888 OLFML3Q9NRN5 406 aa21.69■■□□□ 1.06
RUNX3-202ENST00000338888 CYP3A7-CYP3A51PA0A087WV96 503 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 EDF1O60869 148 aaKnown RBP21.68■■□□□ 1.06
RUNX3-202ENST00000338888 SGPL1O95470 568 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 CYP3A7P24462 503 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 PDCD2Q16342 344 aaPredicted RBP21.68■■□□□ 1.06
RUNX3-202ENST00000338888 DSTYKQ6XUX3 929 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 C4orf50Q6ZRC1 276 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 MIPEPQ99797 713 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.68■■□□□ 1.06
RUNX3-202ENST00000338888 SIGLEC16A6NMB1 481 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 FAM196BA6NMK8 535 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 ATP9AO75110 1047 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 RNF8O76064 485 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 PTK6Q13882 451 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 SPARCL1Q14515 664 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 GRIPAP1Q4V328 841 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 NRG4Q8WWG1 115 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 SCG3Q8WXD2 468 aaKnown RBP21.68■■□□□ 1.06
RUNX3-202ENST00000338888 KAT5Q92993 513 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 ZFP69BQ9UJL9 534 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 LRCH1Q9Y2L9 728 aa21.68■■□□□ 1.06
RUNX3-202ENST00000338888 TULP1O00294 542 aaPredicted RBP21.67■■□□□ 1.06
RUNX3-202ENST00000338888 RAD21O60216 631 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 LMNAP02545 664 aaKnown RBP21.67■■□□□ 1.06
RUNX3-202ENST00000338888 ARHGAP4P98171 946 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 STAT4Q14765 748 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 RCN1Q15293 331 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 HS2ST1Q7LGA3 356 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 CCDC125Q86Z20 511 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 SH3TC2Q8TF17 1288 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 PSPC1Q8WXF1 523 aaKnown RBP21.67■■□□□ 1.06
RUNX3-202ENST00000338888 IFT43Q96FT9 208 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 EURLQ9NYK6 297 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 TRAFD1O14545 582 aaPredicted RBP21.67■■□□□ 1.06
RUNX3-202ENST00000338888 DLG4P78352 724 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 MTDHQ86UE4 582 aaKnown RBP21.67■■□□□ 1.06
RUNX3-202ENST00000338888 ZC3H18Q86VM9 953 aaKnown RBP21.67■■□□□ 1.06
RUNX3-202ENST00000338888 C4orf33Q8N1A6 199 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 DENND1AQ8TEH3 1009 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 FGD4Q96M96 766 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 P2RX7Q99572 595 aaKnown RBP21.67■■□□□ 1.06
RUNX3-202ENST00000338888 FAM118BQ9BPY3 351 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 HERPUD2Q9BSE4 406 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 AGPAT3Q9NRZ7 376 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 PCDHA1Q9Y5I3 950 aa21.67■■□□□ 1.06
RUNX3-202ENST00000338888 C10orf71Q711Q0 1435 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 EXOC3O60645 756 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 MTA2O94776 668 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 RRM1P23921 792 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 CDR2Q01850 454 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 BFSP1Q12934 665 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 TRABD2AQ86V40 505 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 ZNF653Q96CK0 615 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 MBOAT7Q96N66 472 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 ADAM33Q9BZ11 813 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 NUMBLQ9Y6R0 609 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 EIF3DO15371 548 aaKnown RBP eCLIP21.66■■□□□ 1.06
RUNX3-202ENST00000338888 KRT36O76013 467 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 GAS8O95995 478 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 GAP43P17677 238 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 RPA3P35244 121 aaPredicted RBP21.66■■□□□ 1.06
RUNX3-202ENST00000338888 SLC30A10Q6XR72 485 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 NLRP9Q7RTR0 991 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 NOP9Q86U38 636 aaKnown RBP21.66■■□□□ 1.06
RUNX3-202ENST00000338888 EPAS1Q99814 870 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 GORASP1Q9BQQ3 440 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 CADM1Q9BY67 442 aaKnown RBP21.66■■□□□ 1.06
RUNX3-202ENST00000338888 UBN1Q9NPG3 1134 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 TAF1LQ8IZX4 1826 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 LY75O60449 1722 aa21.66■■□□□ 1.06
RUNX3-202ENST00000338888 SMAPO00193 183 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 ZBTB39O15060 712 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 SKIP12755 728 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 RHBDL3P58872 404 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 PICALMQ13492 652 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 PDK4Q16654 411 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 ARMC3Q5W041 872 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 TRABDQ9H4I3 376 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 FAM86B1E9PN63 330 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 POC1B-GALNT4F8VUJ3 575 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 EML1O00423 815 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 RGL2O15211 777 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 ECE2O60344 883 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 FAM86B2P0C5J1 330 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 KCNA3P22001 575 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 CACNA2D1P54289 1103 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 CAV1Q03135 178 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 SLC5A5Q92911 643 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 MRRFQ96E11 262 aaKnown RBP21.65■■□□□ 1.06
RUNX3-202ENST00000338888 EIF2AK1Q9BQI3 630 aaKnown RBP21.65■■□□□ 1.06
RUNX3-202ENST00000338888 TLE6Q9H808 572 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 NPHS2Q9NP85 383 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 PCMTD2Q9NV79 361 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 DMAC2Q9NW81 257 aa21.65■■□□□ 1.06
RUNX3-202ENST00000338888 R3HDM2Q9Y2K5 976 aaKnown RBP21.65■■□□□ 1.06
RUNX3-202ENST00000338888 EMSYQ7Z589 1322 aa21.64■■□□□ 1.06
RUNX3-202ENST00000338888 EXOC1LA0A1B0GW35 172 aa21.64■■□□□ 1.06
RUNX3-202ENST00000338888 SORBS3O60504 671 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms