RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 ZNF677Q86XU0 584 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 REPS2Q8NFH8 660 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 AS3MTQ9HBK9 375 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 SLC9A2Q9UBY0 812 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 ANAPC7Q9UJX3 599 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 CLDN3O15551 220 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 EXTL3O43909 919 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 MYBL1P10243 752 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 RARGP13631 454 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 SCP2P22307 547 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 KCNJ1P48048 391 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 SP4Q02446 784 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 ADCY2Q08462 1091 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 PPP1R7Q15435 360 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 WDR44Q5JSH3 913 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 C6orf118Q5T5N4 469 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 ARMC9Q7Z3E5 817 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 CCDC60Q8IWA6 550 aaPredicted RBP16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 SCYL3Q8IZE3 742 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 MCOLN2Q8IZK6 566 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 CENPTQ96BT3 561 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 TRIM11Q96F44 468 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 POLR3FQ9H1D9 316 aaPredicted RBP16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 AVENQ9NQS1 362 aaPredicted RBP16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 KCNG1Q9UIX4 513 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 PCDHB2Q9Y5E7 798 aa16.11■□□□□ 0.17
TNFSF13-201ENST00000338784 TLDC2A0PJX2 215 aa16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 RGS16O15492 202 aaPredicted RBP16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 RPS12P25398 132 aaKnown RBP16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 LIG4P49917 911 aa16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 BPIFB4P59827 614 aa16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 ACTR2P61160 394 aa16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 CLDN10P78369 228 aa16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 CALCOCO2Q13137 446 aa16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 SGO2Q562F6 1265 aa16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 NBPF12Q5TAG4 269 aaPredicted RBP16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 ABHD15Q6UXT9 468 aa16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 ZNF280CQ8ND82 737 aa16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 ZNF516Q92618 1163 aa16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 SLCO2A1Q92959 643 aa16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 FNBP1Q96RU3 617 aa16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 HACL1Q9UJ83 578 aa16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 TELO2Q9Y4R8 837 aa16.1■□□□□ 0.17
TNFSF13-201ENST00000338784 RIPK2O43353 540 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 CALCAP01258 141 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 DSG3P32926 999 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 SLC1A1P43005 524 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 IFT88Q13099 833 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 PSMD6Q15008 389 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 GNPTABQ3T906 1256 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 XKR3Q5GH77 459 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 RNF187Q5TA31 235 aaPredicted RBP16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 DCAF15Q66K64 600 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 MIS18BP1Q6P0N0 1132 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 C6orf89Q6UWU4 347 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 MAIP1Q8WWC4 291 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 TMEM109Q9BVC6 243 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 PICK1Q9NRD5 415 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 DDX20Q9UHI6 824 aaKnown RBP16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 ZNF214Q9UL59 606 aaPredicted RBP16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 MYPNQ86TC9 1320 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 C5orf60A6NFR6 353 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 STAM2O75886 525 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 FSBPO95073 299 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 AGTP01019 485 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 TNNI1P19237 187 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 FGFR4P22455 802 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 MMP13P45452 471 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 NSFP46459 744 aaKnown RBP16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 STRN3Q13033 797 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 ZACNQ401N2 412 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 DALRD3Q5D0E6 543 aaKnown RBP16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 ERMARDQ5T6L9 678 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 SAMD7Q7Z3H4 446 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 MDM1Q8TC05 714 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 CPA5Q8WXQ8 436 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 FAM84AQ96KN4 292 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 AZI2Q9H6S1 392 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 ADAMTS5Q9UNA0 930 aa16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.09■□□□□ 0.17
TNFSF13-201ENST00000338784 MROH7Q68CQ1 1323 aa16.08■□□□□ 0.17
TNFSF13-201ENST00000338784 SMIM23A6NLE4 172 aa16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 PTPRAP18433 802 aa16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 RRM1P23921 792 aa16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 POLGP54098 1239 aaPredicted RBP16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 QPCTQ16769 361 aa16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 MTERF2Q49AM1 385 aa16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 LMBRD2Q68DH5 695 aaPredicted RBP16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 MICALL2Q8IY33 904 aa16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 C1orf54Q8WWF1 131 aa16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 ZKSCAN4Q969J2 545 aaPredicted RBP16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 XPO6Q96QU8 1125 aaKnown RBP16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 CEP89Q96ST8 783 aa16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 STMN4Q9H169 189 aaPredicted RBP16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 CYP39A1Q9NYL5 469 aa16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 WHRNQ9P202 907 aa16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 CAPN7Q9Y6W3 813 aa16.08■□□□□ 0.16
TNFSF13-201ENST00000338784 SPATA31C2B4DYI2 1134 aa16.07■□□□□ 0.16
TNFSF13-201ENST00000338784 HLA-DRAP01903 254 aa16.07■□□□□ 0.16
TNFSF13-201ENST00000338784 C4BPAP04003 597 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms