RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 KANK3Q6NY19 840 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 FUT10Q6P4F1 479 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 PDXDC1Q6P996 788 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 ELMSAN1Q6PJG2 1045 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 ALYREFQ86V81 257 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 GPR65Q8IYL9 337 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 FAM212AQ96EL1 285 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 PAGE5Q96GU1 130 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 CHAMP1Q96JM3 812 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 STRA6Q9BX79 667 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 BLZF1Q9H2G9 400 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 GDPD2Q9HCC8 539 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 MARCH5Q9NX47 278 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 HPSEQ9Y251 543 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 PCDHGC5Q9Y5F6 944 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 STYXL1Q9Y6J8 313 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 TDRD15B5MCY1 1934 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 MUC6Q6W4X9 2439 aa12.33□□□□□ -0.44
SLC28A1-202ENST00000338602 ANKRD63C9JTQ0 380 aa12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 H3BQ06 376 aaPredicted RBP12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 TMEM189-UBE2V1I3L0A0 370 aa12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 KIAA0391O15091 583 aaKnown RBP12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 ACTN4O43707 911 aaKnown RBP12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 PRPF6O94906 941 aaKnown RBP12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 CXCL8P10145 99 aa12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 GARTP22102 1010 aa12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 KLRC2P26717 231 aa12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 NDUFA8P51970 172 aa12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 PSMD2Q13200 908 aa12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 CUL4BQ13620 913 aa12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 CASP10Q92851 521 aa12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 KIF12Q96FN5 646 aa12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 EXOC1Q9NV70 894 aa12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 CHMP5Q9NZZ3 219 aa12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 DPP7Q9UHL4 492 aa12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 CD207Q9UJ71 328 aa12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 UBQLN1Q9UMX0 589 aaKnown RBP12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 UBE4BO95155 1302 aa12.32□□□□□ -0.44
SLC28A1-202ENST00000338602 TTC26A0AVF1 554 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 SPDYE4A6NLX3 237 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 C2CD2LO14523 706 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 LINC01565O15544 149 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 CLASP2O75122 1294 aaKnown RBP12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 KIF4AO95239 1232 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 ADH1AP07327 375 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 HOXB8P17481 243 aaPredicted RBP12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 CYP3A5P20815 502 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 GTF2F1P35269 517 aaKnown RBP eCLIP12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 ACOT2P49753 483 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 CLCNKBP51801 687 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 CASP5P51878 434 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 SNRPFP62306 86 aaKnown RBP12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 PTPN14Q15678 1187 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 NAB2Q15742 525 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 UPP1Q16831 310 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 FAM171A1Q5VUB5 890 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 PTCRAQ6ISU1 281 aaPredicted RBP12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 SLC39A4Q6P5W5 647 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 TMEM184AQ6ZMB5 413 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 HS2ST1Q7LGA3 356 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 BEST2Q8NFU1 509 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 ZNF507Q8TCN5 953 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 AUTS2Q8WXX7 1259 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 RABGGTAQ92696 567 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 ZMAT2Q96NC0 199 aaKnown RBP12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 PAAF1Q9BRP4 392 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 TTPALQ9BTX7 342 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 HAPLN2Q9GZV7 340 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 ASB7Q9H672 318 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 HOOK1Q9UJC3 728 aaKnown RBP12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 CPSF3Q9UKF6 684 aaKnown RBP12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 NUB1Q9Y5A7 615 aa12.31□□□□□ -0.44
SLC28A1-202ENST00000338602 LACTBL1A8MY62 500 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 TULP1O00294 542 aaPredicted RBP12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 PODXLO00592 558 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 ZNF202O95125 648 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 KIF20AO95235 890 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 IL18RAPO95256 599 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 BMP1P13497 986 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 LTBRP36941 435 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 TNFSF9P41273 254 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 KCNQ1P51787 676 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 DSG1Q02413 1049 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 KCNA1Q09470 495 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 ENOX2Q16206 610 aaKnown RBP12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 KIAA0319Q5VV43 1072 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 LLGL2Q6P1M3 1020 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 ARMCX5Q6P1M9 558 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 KRBA2Q6ZNG9 492 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 CEP57Q86XR8 500 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 GRAMD1CQ8IYS0 662 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 RNF168Q8IYW5 571 aaPredicted RBP12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 GOLGA5Q8TBA6 731 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 HASPINQ8TF76 798 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 RIN2Q8WYP3 895 aaPredicted RBP12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 KLHL5Q96PQ7 755 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 LRFN3Q9BTN0 628 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 VN1R3Q9BXE9 311 aa12.3□□□□□ -0.44
SLC28A1-202ENST00000338602 GPR62Q9BZJ7 368 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms