RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 BLOC1S4Q9NUP1 217 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 HCFC1R1Q9NWW0 138 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 RBM19Q9Y4C8 960 aaKnown RBP14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 CLIC4Q9Y696 253 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 CLUHO75153 1309 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 PHLPP2Q6ZVD8 1323 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 DENND4AQ7Z401 1863 aa14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 MAPTP10636 758 aaKnown RBP14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 MCF2P10911 925 aa14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 MCM2P49736 904 aa14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 YARSP54577 528 aaKnown RBP14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 KARSQ15046 597 aaKnown RBP14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 ARL6IP4Q66PJ3 421 aaKnown RBP14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 POTEHQ6S545 545 aa14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 MPZL3Q6UWV2 235 aa14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 GET4Q7L5D6 327 aaPredicted RBP14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 GPR65Q8IYL9 337 aa14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 FLCNQ8NFG4 579 aa14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 SPIRE2Q8WWL2 714 aa14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 CDK5RAP3Q96JB5 506 aa14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 SNX27Q96L92 541 aa14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 KCNH6Q9H252 994 aa14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 FBXW11Q9UKB1 542 aa14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 POLIQ9UNA4 740 aa14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 CDY1Q9Y6F8 540 aa14.64□□□□□ -0.07
NUDCD3-201ENST00000338427 VPS37CA5D8V6 355 aaPredicted RBP14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 PODXLO00592 558 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 PAPLNO95428 1278 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 C8AP07357 584 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 CFHP08603 1231 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 LAMP2P13473 410 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 TNFSF9P41273 254 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 GUCY2FP51841 1108 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 ARPP19P56211 112 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 CUL4AQ13619 759 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 RAB33AQ14088 237 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 PPM1LQ5SGD2 360 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 ZBTB41Q5SVQ8 909 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 AXDND1Q5T1B0 1012 aaPredicted RBP14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 GPBP1Q86WP2 473 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 ITFG1Q8TB96 612 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 DDX27Q96GQ7 796 aaKnown RBP14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 EPSTI1Q96J88 318 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 IKZF4Q9H2S9 585 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 ZDHHC7Q9NXF8 308 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 ANKFY1Q9P2R3 1169 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 DPP7Q9UHL4 492 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 KMT2EQ8IZD2 1858 aa14.63□□□□□ -0.07
NUDCD3-201ENST00000338427 TMEM189-UBE2V1I3L0A0 370 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 KCNE1P15382 129 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 PLCG1P19174 1290 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 FSHRP23945 695 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 MARCKSP29966 332 aaPredicted RBP14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 UBA7P41226 1012 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 MATR3P43243 847 aaKnown RBP eCLIP14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 CEBPZQ03701 1054 aaKnown RBP14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 ELAVL2Q12926 359 aaKnown RBP14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 STRN3Q13033 797 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 CYP26C1Q6V0L0 522 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 HAUS6Q7Z4H7 955 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 MYCT1Q8N699 235 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 SLC7A14Q8TBB6 771 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 CLIC6Q96NY7 704 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 REEP2Q9BRK0 252 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 ZHX3Q9H4I2 956 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 C17orf75Q9HAS0 396 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 EPS15L1Q9UBC2 864 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 DNMT3BQ9UBC3 853 aaKnown RBP14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 MTRRQ9UBK8 725 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 TUBGCP4Q9UGJ1 667 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 DOCK8Q8NF50 2099 aa14.62□□□□□ -0.07
NUDCD3-201ENST00000338427 KRBA1A5PL33 1030 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 LACTBL1A8MY62 500 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 TOM1L1O75674 476 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 SEC24AO95486 1093 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 C1RP00736 705 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 CXCL8P10145 99 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 NMT1P30419 496 aaKnown RBP14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 SMTNP53814 917 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 PTPN5P54829 565 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 NCKAP1LP55160 1127 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 PTPAQ15257 358 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 VARS2Q5ST30 1063 aaKnown RBP14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 CWF19L1Q69YN2 538 aaKnown RBP14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 ASTLQ6HA08 431 aaPredicted RBP14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 PARM1Q6UWI2 310 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 APBB1IPQ7Z5R6 666 aaPredicted RBP14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 SIX5Q8N196 739 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 CALML4Q96GE6 196 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 UROC1Q96N76 676 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 TIPINQ9BVW5 301 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 RHOBTB2Q9BYZ6 727 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 PANK2Q9BZ23 570 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 MFSD1Q9H3U5 465 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 TOPORSQ9NS56 1045 aaPredicted RBP14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 CNTN3Q9P232 1028 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 IGSF9Q9P2J2 1179 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 FBXL21Q9UKT6 434 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms