RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 NELL2Q99435 816 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 CCDC113Q9H0I3 377 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 EPC1Q9H2F5 836 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 TUFT1Q9NNX1 390 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 GDE1Q9NZC3 331 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 SMG5Q9UPR3 1016 aaKnown RBP12.67□□□□□ -0.38
CSMD2-202ENST00000338325 GDAQ9Y2T3 454 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 CDY1Q9Y6F8 540 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 ACKR2O00590 384 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 LILRB5O75023 590 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 EDN1P05305 212 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 SPATA31C1P0DKV0 1188 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 FDPSP14324 419 aaKnown RBP12.67□□□□□ -0.38
CSMD2-202ENST00000338325 EEF1DP3Q658K8 133 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 BSNDQ8WZ55 320 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 NELL1Q92832 810 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 DDX27Q96GQ7 796 aaKnown RBP12.67□□□□□ -0.38
CSMD2-202ENST00000338325 UROC1Q96N76 676 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 AVENQ9NQS1 362 aaPredicted RBP12.67□□□□□ -0.38
CSMD2-202ENST00000338325 PRMT8Q9NR22 394 aaPredicted RBP12.67□□□□□ -0.38
CSMD2-202ENST00000338325 MRPS17Q9Y2R5 130 aaKnown RBP12.67□□□□□ -0.38
CSMD2-202ENST00000338325 BACE2Q9Y5Z0 518 aa12.67□□□□□ -0.38
CSMD2-202ENST00000338325 GPR179Q6PRD1 2367 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 PDCD11Q14690 1871 aaKnown RBP12.66□□□□□ -0.38
CSMD2-202ENST00000338325 CITO14578 2027 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 MED24O75448 989 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 B3GAT3O94766 335 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 RHOP08100 348 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 CEBPBP17676 345 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 LIG1P18858 919 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 TKTP29401 623 aaKnown RBP12.66□□□□□ -0.38
CSMD2-202ENST00000338325 NAMPTP43490 491 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 CLCNKBP51801 687 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 SLC5A9Q2M3M2 681 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 GLRA4Q5JXX5 417 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 ZNF852Q6ZMS4 543 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 ANKS3Q6ZW76 656 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 CATSPER3Q86XQ3 398 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 DEPTORQ8TB45 409 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 DNASE1L2Q92874 299 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 ELSPBP1Q96BH3 223 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 MCRS1Q96EZ8 462 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 PPP1R10Q96QC0 940 aaKnown RBP12.66□□□□□ -0.38
CSMD2-202ENST00000338325 NACC1Q96RE7 527 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 PLA2G2FQ9BZM2 168 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 HEBP1Q9NRV9 189 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 DAXXQ9UER7 740 aaPredicted RBP12.66□□□□□ -0.38
CSMD2-202ENST00000338325 USP20Q9Y2K6 914 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 NCOR2Q9Y618 2525 aa12.66□□□□□ -0.38
CSMD2-202ENST00000338325 ARHGEF37A1IGU5 675 aa12.65□□□□□ -0.38
CSMD2-202ENST00000338325 BTBD18B2RXH4 712 aa12.65□□□□□ -0.38
CSMD2-202ENST00000338325 TRAPPC3O43617 180 aa12.65□□□□□ -0.38
CSMD2-202ENST00000338325 LRG1P02750 347 aa12.65□□□□□ -0.38
CSMD2-202ENST00000338325 PTPN2P17706 415 aa12.65□□□□□ -0.38
CSMD2-202ENST00000338325 IGFBP6P24592 240 aaPredicted RBP12.65□□□□□ -0.38
CSMD2-202ENST00000338325 LMNB2Q03252 620 aa12.65□□□□□ -0.38
CSMD2-202ENST00000338325 PPP2R5AQ15172 486 aa12.65□□□□□ -0.38
CSMD2-202ENST00000338325 UPP1Q16831 310 aa12.65□□□□□ -0.38
CSMD2-202ENST00000338325 TANGO2Q6ICL3 276 aa12.65□□□□□ -0.38
CSMD2-202ENST00000338325 TSSK4Q6SA08 328 aa12.65□□□□□ -0.38
CSMD2-202ENST00000338325 PADI6Q6TGC4 694 aa12.65□□□□□ -0.38
CSMD2-202ENST00000338325 DIS3L2Q8IYB7 885 aaKnown RBP12.65□□□□□ -0.38
CSMD2-202ENST00000338325 POLR3CQ9BUI4 534 aaPredicted RBP12.65□□□□□ -0.38
CSMD2-202ENST00000338325 FAM126AQ9BYI3 521 aaPredicted RBP12.65□□□□□ -0.38
CSMD2-202ENST00000338325 TMEM60Q9H2L4 133 aa12.65□□□□□ -0.38
CSMD2-202ENST00000338325 ARHGEF35A5YM69 484 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 PRR5-ARHGAP8B1AHC4 643 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 I3L4J1 428 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 TBC1D4O60343 1298 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 CYP11B2P19099 503 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 BRCC3P46736 316 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 ARHGAP8P85298 464 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 ROR1Q01973 937 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 ADCY1Q08828 1119 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 FZD5Q13467 585 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 ANKRD1Q15327 319 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 ATF7IP2Q5U623 682 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 POTEHQ6S545 545 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 CD300LGQ6UXG3 332 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 APBB1IPQ7Z5R6 666 aaPredicted RBP12.64□□□□□ -0.39
CSMD2-202ENST00000338325 C3orf58Q8NDZ4 430 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 GOLGA2P5Q9HBQ8 144 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 CDV3Q9UKY7 258 aaKnown RBP12.64□□□□□ -0.39
CSMD2-202ENST00000338325 USP18Q9UMW8 372 aa12.64□□□□□ -0.39
CSMD2-202ENST00000338325 SHISA7A6NL88 538 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 PRRG1O14668 218 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 FCARP24071 287 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 ELF1P32519 619 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 MCM7P33993 719 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 EFNA5P52803 228 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 FOSBP53539 338 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 ATXN1P54253 815 aaKnown RBP12.63□□□□□ -0.39
CSMD2-202ENST00000338325 MTAPQ13126 283 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 TRIM29Q14134 588 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 PRSS36Q5K4E3 855 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 NT5DC1Q5TFE4 455 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 SLC8B1Q6J4K2 584 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 NECAB1Q8N987 351 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 ZNF461Q8TAF7 563 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 ERMNQ8TAM6 284 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms