RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 CTNNB1P35222 781 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 PPM1AP35813 382 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 OR1G1P47890 313 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 BCAR1P56945 870 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 STX17P56962 302 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 KRT17Q04695 432 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 TMEM132DQ14C87 1099 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 EPC2Q52LR7 807 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 GLRA4Q5JXX5 417 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 ZNF697Q5TEC3 545 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 COLGALT2Q8IYK4 626 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 COLGALT1Q8NBJ5 622 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 ZSWIM2Q8NEG5 633 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 BEST2Q8NFU1 509 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 ARNTL2Q8WYA1 636 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 MFSD14AQ96MC6 490 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 UROC1Q96N76 676 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 ZMAT2Q96NC0 199 aaKnown RBP12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 PPP1R10Q96QC0 940 aaKnown RBP12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 C17orf80Q9BSJ5 609 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 PUF60Q9UHX1 559 aaKnown RBP12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 CTNND2Q9UQB3 1225 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 R3HCC1Q9Y3T6 440 aaKnown RBP12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 C2CD2Q9Y426 696 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 NRP1O14786 923 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 EPB41P11171 864 aaKnown RBP12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 TFAMQ00059 246 aaKnown RBP12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 SPAG1Q07617 926 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 CYP24A1Q07973 514 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 DSC1Q08554 894 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 PSMD6Q15008 389 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 ZBTB6Q15916 424 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 STX1AQ16623 288 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 TPD52L1Q16890 204 aaPredicted RBP12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 DUOXA2Q1HG44 320 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 JADE1Q6IE81 842 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 DCLRE1AQ6PJP8 1040 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 FILIP1Q7Z7B0 1213 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 FAM186BQ8IYM0 893 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 CSGALNACT2Q8N6G5 542 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 FBXO22Q8NEZ5 403 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 TMC2Q8TDI7 906 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 CCDC127Q96BQ5 260 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 LRCH3Q96II8 777 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 CEP63Q96MT8 703 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 C11orf84Q9BUA3 381 aaPredicted RBP12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 MKNK1Q9BUB5 465 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 CXCL16Q9H2A7 254 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 CERS4Q9HA82 394 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 PDE11AQ9HCR9 933 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 DNAJB4Q9UDY4 337 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 MTUS1Q9ULD2 1270 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 PLAGL2Q9UPG8 496 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 MICAL3Q7RTP6 2002 aa12.91□□□□□ -0.34
SPTLC1-202ENST00000337841 TRIM49BA6NDI0 452 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 NT5C1B-RDH14C9J2C7 533 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 C5orf67F2Z3F1 127 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 MEFVO15553 781 aaPredicted RBP12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 TADA2AO75478 443 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 ARHGEF15O94989 841 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 GNA14O95837 355 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 TNNC2P02585 160 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 CCDC192P0DO97 292 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 DLATP10515 647 aaKnown RBP12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 TNNI1P19237 187 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 SLC11A1P49279 550 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 CASP4P49662 377 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 AP3M2P53677 418 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 PMS1P54277 932 aaKnown RBP12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 GPM6BQ13491 265 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 BMS1Q14692 1282 aaKnown RBP12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 DPCR1Q3MIW9 517 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 SPATA1Q5VX52 437 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 TTI2Q6NXR4 508 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 INTS8Q75QN2 995 aaKnown RBP12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 KLHL23Q8NBE8 558 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 C18orf25Q96B23 403 aaPredicted RBP12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 TMEM169Q96HH4 297 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 ANKRD36BP1Q96IX9 119 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 DUSP9Q99956 384 aaKnown RBP12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 SRRTQ9BXP5 876 aaKnown RBP12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 NAT10Q9H0A0 1025 aaKnown RBP12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 METTL14Q9HCE5 456 aaKnown RBP12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 DPP3Q9NY33 737 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 HCSTQ9UBK5 93 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 STK39Q9UEW8 545 aa12.9□□□□□ -0.34
SPTLC1-202ENST00000337841 CASTOR2A6NHX0 329 aa12.89□□□□□ -0.35
SPTLC1-202ENST00000337841 H3BNC9 293 aa12.89□□□□□ -0.35
SPTLC1-202ENST00000337841 SLC16A3O15427 465 aaKnown RBP12.89□□□□□ -0.35
SPTLC1-202ENST00000337841 STX10O60499 249 aa12.89□□□□□ -0.35
SPTLC1-202ENST00000337841 AKAP3O75969 853 aa12.89□□□□□ -0.35
SPTLC1-202ENST00000337841 FGF18O76093 207 aa12.89□□□□□ -0.35
SPTLC1-202ENST00000337841 NFICP08651 508 aa12.89□□□□□ -0.35
SPTLC1-202ENST00000337841 TMEM191BP0C7N4 346 aa12.89□□□□□ -0.35
SPTLC1-202ENST00000337841 LINC00271P0C7V0 271 aa12.89□□□□□ -0.35
SPTLC1-202ENST00000337841 PAX3P23760 479 aa12.89□□□□□ -0.35
SPTLC1-202ENST00000337841 LRPAP1P30533 357 aa12.89□□□□□ -0.35
SPTLC1-202ENST00000337841 VAMP7P51809 220 aa12.89□□□□□ -0.35
SPTLC1-202ENST00000337841 PLCB3Q01970 1234 aa12.89□□□□□ -0.35
SPTLC1-202ENST00000337841 UBE3AQ05086 875 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms