RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 HDAC6Q9UBN7 1215 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 CDK5RAP2Q96SN8 1893 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 URB1O60287 2271 aaKnown RBP12.92□□□□□ -0.34
FN1-202ENST00000336916 ZNF157P51786 506 aaPredicted RBP12.92□□□□□ -0.34
FN1-202ENST00000336916 MROH8Q9H579 483 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 ANKEF1Q9NU02 776 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 AIPL1Q9NZN9 384 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 SUPT20HL2P0C7V6 817 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 ALDH7A1P49419 539 aaKnown RBP12.92□□□□□ -0.34
FN1-202ENST00000336916 THEMIS2Q5TEJ8 643 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 SENP7Q9BQF6 1050 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 FAM217BQ9NTX9 383 aaPredicted RBP12.92□□□□□ -0.34
FN1-202ENST00000336916 TLR2O60603 784 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 H2AFYO75367 372 aaKnown RBP12.92□□□□□ -0.34
FN1-202ENST00000336916 GSNP06396 782 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 NSUN2Q08J23 767 aaKnown RBP eCLIP12.92□□□□□ -0.34
FN1-202ENST00000336916 SF3B3Q15393 1217 aaKnown RBP12.92□□□□□ -0.34
FN1-202ENST00000336916 QRICH1Q2TAL8 776 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 RARS2Q5T160 578 aaKnown RBP12.92□□□□□ -0.34
FN1-202ENST00000336916 RAPGEF5Q92565 580 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 NT5C1AQ9BXI3 368 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 SNX5Q9Y5X3 404 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 IFNAR2P48551 515 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 LDHDQ86WU2 507 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 RIBC1Q8N443 379 aaPredicted RBP12.92□□□□□ -0.34
FN1-202ENST00000336916 PCSK9Q8NBP7 692 aaKnown RBP12.92□□□□□ -0.34
FN1-202ENST00000336916 IQSEC2Q5JU85 1478 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 PALMO75781 387 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 PLEKHA8P1O95397 391 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 RGS2P41220 211 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 NME3Q13232 169 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 RMDN1Q96DB5 314 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 EVA1BQ9NVM1 165 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 GTSE1Q9NYZ3 720 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 ZFATQ9P243 1243 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 SPACA6W5XKT8 324 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 GCLMP48507 274 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 SERPINB9P50453 376 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 RBBP7Q16576 425 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 SFR1Q86XK3 245 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 GLT1D1Q96MS3 346 aa12.92□□□□□ -0.34
FN1-202ENST00000336916 NKRFO15226 690 aaKnown RBP eCLIP12.92□□□□□ -0.342e-17■□□□□ 8.6
FN1-202ENST00000336916 RNASEH1O60930 286 aaKnown RBP12.92□□□□□ -0.34
FN1-202ENST00000336916 SYF2O95926 243 aaKnown RBP12.92□□□□□ -0.34
FN1-202ENST00000336916 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.92□□□□□ -0.34
FN1-202ENST00000336916 C16orf86Q6ZW13 317 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 VPS37AQ8NEZ2 397 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 SMG5Q9UPR3 1016 aaKnown RBP12.91□□□□□ -0.34
FN1-202ENST00000336916 IL10P22301 178 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 OXCT1P55809 520 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 EDRF1Q3B7T1 1238 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 TTC17Q96AE7 1141 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 DYRK3O43781 588 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 ARIH2O95376 493 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 PRKCBP05771 671 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 CDH6P55285 790 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 DRAP1Q14919 205 aaPredicted RBP12.91□□□□□ -0.34
FN1-202ENST00000336916 PDK1Q15118 436 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 EFHC1Q5JVL4 640 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 DDX53Q86TM3 631 aaKnown RBP12.91□□□□□ -0.34
FN1-202ENST00000336916 TAF1DQ9H5J8 278 aaPredicted RBP12.91□□□□□ -0.34
FN1-202ENST00000336916 CYP27B1O15528 508 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 BTBD6Q96KE9 485 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 SOWAHDA6NJG2 315 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 GPR182O15218 404 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 SLC16A4O15374 487 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 PRPF4O43172 522 aaKnown RBP eCLIP12.91□□□□□ -0.34
FN1-202ENST00000336916 CYP2C8P10632 490 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 PRDX5P30044 214 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 GEMIN4P57678 1058 aaKnown RBP12.91□□□□□ -0.34
FN1-202ENST00000336916 TTLL9Q3SXZ7 439 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 RNF149Q8NC42 400 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 FAM32AQ9Y421 112 aaKnown RBP12.91□□□□□ -0.34
FN1-202ENST00000336916 POTEB3A0JP26 581 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 DFFAO00273 331 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 ITGA4P13612 1032 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 CXCR5P32302 372 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 C2orf54Q08AI8 447 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 STAT4Q14765 748 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 POTEBQ6S5H4 581 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 EEF2KMTQ96G04 330 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 ABHD8Q96I13 439 aa12.91□□□□□ -0.34
FN1-202ENST00000336916 RGPD8O14715 1765 aaPredicted RBP12.9□□□□□ -0.34
FN1-202ENST00000336916 OCA2Q04671 838 aa12.9□□□□□ -0.34
FN1-202ENST00000336916 SEPT1Q8WYJ6 367 aa12.9□□□□□ -0.34
FN1-202ENST00000336916 DYDC2Q96IM9 177 aa12.9□□□□□ -0.34
FN1-202ENST00000336916 RIT2Q99578 217 aa12.9□□□□□ -0.34
FN1-202ENST00000336916 MTMR4Q9NYA4 1195 aa12.9□□□□□ -0.34
FN1-202ENST00000336916 POTEFA5A3E0 1075 aa12.9□□□□□ -0.34
FN1-202ENST00000336916 NDUFS3O75489 264 aa12.9□□□□□ -0.34
FN1-202ENST00000336916 FTLP02792 175 aaPredicted RBP12.9□□□□□ -0.34
FN1-202ENST00000336916 POTEIP0CG38 1075 aa12.9□□□□□ -0.34
FN1-202ENST00000336916 PTK6Q13882 451 aa12.9□□□□□ -0.34
FN1-202ENST00000336916 POLD3Q15054 466 aaPredicted RBP12.9□□□□□ -0.34
FN1-202ENST00000336916 ARMC6Q6NXE6 501 aa12.9□□□□□ -0.34
FN1-202ENST00000336916 POTEGQ6S5H5 508 aa12.9□□□□□ -0.34
FN1-202ENST00000336916 POTEEQ6S8J3 1075 aa12.9□□□□□ -0.34
FN1-202ENST00000336916 FAM151AQ8WW52 585 aa12.9□□□□□ -0.34
FN1-202ENST00000336916 DHX35Q9H5Z1 703 aaKnown RBP12.9□□□□□ -0.34
FN1-202ENST00000336916 PITPNM2Q9BZ72 1349 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms