RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 RPL17P18621 184 aaKnown RBP16.3■□□□□ 0.2
KATNA1-201ENST00000335643 CASP1P29466 404 aa16.3■□□□□ 0.2
KATNA1-201ENST00000335643 MATR3P43243 847 aaKnown RBP eCLIP16.3■□□□□ 0.2
KATNA1-201ENST00000335643 RESP18Q5W5W9 173 aa16.3■□□□□ 0.2
KATNA1-201ENST00000335643 ATL3Q6DD88 541 aa16.3■□□□□ 0.2
KATNA1-201ENST00000335643 PRSS55Q6UWB4 352 aaPredicted RBP16.3■□□□□ 0.2
KATNA1-201ENST00000335643 ADHFE1Q8IWW8 467 aa16.3■□□□□ 0.2
KATNA1-201ENST00000335643 HPS3Q969F9 1004 aa16.3■□□□□ 0.2
KATNA1-201ENST00000335643 RXFP1Q9HBX9 757 aa16.3■□□□□ 0.2
KATNA1-201ENST00000335643 RTN4Q9NQC3 1192 aaKnown RBP16.3■□□□□ 0.2
KATNA1-201ENST00000335643 STK39Q9UEW8 545 aa16.3■□□□□ 0.2
KATNA1-201ENST00000335643 TUBGCP4Q9UGJ1 667 aa16.3■□□□□ 0.2
KATNA1-201ENST00000335643 SF3B1O75533 1304 aaKnown RBP eCLIP16.29■□□□□ 0.2
KATNA1-201ENST00000335643 A0A0B4J269 797 aa16.29■□□□□ 0.2
KATNA1-201ENST00000335643 C19orf67A6NJJ6 358 aa16.29■□□□□ 0.2
KATNA1-201ENST00000335643 I3L4J1 428 aa16.29■□□□□ 0.2
KATNA1-201ENST00000335643 POLR2DO15514 142 aaKnown RBP16.29■□□□□ 0.2
KATNA1-201ENST00000335643 KLRC2P26717 231 aa16.29■□□□□ 0.2
KATNA1-201ENST00000335643 BMS1Q14692 1282 aaKnown RBP16.29■□□□□ 0.2
KATNA1-201ENST00000335643 USP41Q3LFD5 358 aa16.29■□□□□ 0.2
KATNA1-201ENST00000335643 GLYCTKQ8IVS8 523 aa16.29■□□□□ 0.2
KATNA1-201ENST00000335643 GJD3Q8N144 294 aa16.29■□□□□ 0.2
KATNA1-201ENST00000335643 RIN2Q8WYP3 895 aaPredicted RBP16.29■□□□□ 0.2
KATNA1-201ENST00000335643 EMILIN2Q9BXX0 1053 aa16.29■□□□□ 0.2
KATNA1-201ENST00000335643 TRIM9Q9C026 710 aa16.29■□□□□ 0.2
KATNA1-201ENST00000335643 TNMDQ9H2S6 317 aa16.29■□□□□ 0.2
KATNA1-201ENST00000335643 MRPL44Q9H9J2 332 aaKnown RBP16.29■□□□□ 0.2
KATNA1-201ENST00000335643 CFAP45Q9UL16 551 aa16.29■□□□□ 0.2
KATNA1-201ENST00000335643 TTC26A0AVF1 554 aa16.28■□□□□ 0.2
KATNA1-201ENST00000335643 B3GAT3O94766 335 aa16.28■□□□□ 0.2
KATNA1-201ENST00000335643 ADSSP30520 456 aa16.28■□□□□ 0.2
KATNA1-201ENST00000335643 BRCC3P46736 316 aa16.28■□□□□ 0.2
KATNA1-201ENST00000335643 ENOX2Q16206 610 aaKnown RBP16.28■□□□□ 0.2
KATNA1-201ENST00000335643 HERC4Q5GLZ8 1057 aaPredicted RBP16.28■□□□□ 0.2
KATNA1-201ENST00000335643 FAM171A1Q5VUB5 890 aa16.28■□□□□ 0.2
KATNA1-201ENST00000335643 ZSWIM2Q8NEG5 633 aa16.28■□□□□ 0.2
KATNA1-201ENST00000335643 LEO1Q8WVC0 666 aaPredicted RBP16.28■□□□□ 0.2
KATNA1-201ENST00000335643 MSTO1Q9BUK6 570 aa16.28■□□□□ 0.2
KATNA1-201ENST00000335643 OLFML3Q9NRN5 406 aa16.28■□□□□ 0.2
KATNA1-201ENST00000335643 PANK4Q9NVE7 773 aa16.28■□□□□ 0.2
KATNA1-201ENST00000335643 FAM50BQ9Y247 325 aa16.28■□□□□ 0.2
KATNA1-201ENST00000335643 DENND4AQ7Z401 1863 aa16.27■□□□□ 0.2
KATNA1-201ENST00000335643 TMEM189-UBE2V1I3L0A0 370 aa16.27■□□□□ 0.2
KATNA1-201ENST00000335643 OGTO15294 1046 aa16.27■□□□□ 0.2
KATNA1-201ENST00000335643 SRGAP2BP0DMP2 458 aa16.27■□□□□ 0.2
KATNA1-201ENST00000335643 GAP43P17677 238 aa16.27■□□□□ 0.2
KATNA1-201ENST00000335643 SCP2P22307 547 aa16.27■□□□□ 0.2
KATNA1-201ENST00000335643 SSTR3P32745 418 aaPredicted RBP16.27■□□□□ 0.2
KATNA1-201ENST00000335643 CBX2Q14781 532 aaPredicted RBP16.27■□□□□ 0.2
KATNA1-201ENST00000335643 RARS2Q5T160 578 aaKnown RBP16.27■□□□□ 0.2
KATNA1-201ENST00000335643 KIAA1841Q6NSI8 718 aa16.27■□□□□ 0.2
KATNA1-201ENST00000335643 CEP57Q86XR8 500 aa16.27■□□□□ 0.2
KATNA1-201ENST00000335643 TMEM87AQ8NBN3 555 aa16.27■□□□□ 0.2
KATNA1-201ENST00000335643 LNX1Q8TBB1 728 aaPredicted RBP16.27■□□□□ 0.2
KATNA1-201ENST00000335643 FBXL18Q96ME1 805 aa16.27■□□□□ 0.2
KATNA1-201ENST00000335643 EPHX3Q9H6B9 360 aa16.27■□□□□ 0.2
KATNA1-201ENST00000335643 SEL1LQ9UBV2 794 aa16.27■□□□□ 0.2
KATNA1-201ENST00000335643 PRKAG3Q9UGI9 489 aa16.27■□□□□ 0.2
KATNA1-201ENST00000335643 CPSF3Q9UKF6 684 aaKnown RBP16.27■□□□□ 0.2
KATNA1-201ENST00000335643 STYXL1Q9Y6J8 313 aa16.27■□□□□ 0.2
KATNA1-201ENST00000335643 WDFY4Q6ZS81 3184 aa16.27■□□□□ 0.2
KATNA1-201ENST00000335643 MTCL1Q9Y4B5 1905 aaKnown RBP16.27■□□□□ 0.19
KATNA1-201ENST00000335643 LACTBL1A8MY62 500 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 PODXLO00592 558 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 ADAM12O43184 909 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 GCNT3O95395 438 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 CLTAP09496 248 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 SPATA31D3P0C874 917 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 HOXB8P17481 243 aaPredicted RBP16.26■□□□□ 0.19
KATNA1-201ENST00000335643 ACOT2P49753 483 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 GUCY2FP51841 1108 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 L1TD1Q5T7N2 865 aaKnown RBP16.26■□□□□ 0.19
KATNA1-201ENST00000335643 DCLRE1AQ6PJP8 1040 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 TMC5Q6UXY8 1006 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 SPATA31D4Q6ZUB0 917 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 PALB2Q86YC2 1186 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 GRAMD1CQ8IYS0 662 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 IQUBQ8NA54 791 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 UROC1Q96N76 676 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 CLSTN3Q9BQT9 956 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 TTPALQ9BTX7 342 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 ADAM7Q9H2U9 754 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.26■□□□□ 0.19
KATNA1-201ENST00000335643 ADH1AP07327 375 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 ADRB2P07550 413 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 FGFR3P22607 806 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 SP100P23497 879 aaPredicted RBP16.26■□□□□ 0.19
KATNA1-201ENST00000335643 TKTP29401 623 aaKnown RBP16.26■□□□□ 0.19
KATNA1-201ENST00000335643 ZBTB6Q15916 424 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 CRELD2Q6UXH1 353 aaPredicted RBP16.26■□□□□ 0.19
KATNA1-201ENST00000335643 RSPO2Q6UXX9 243 aaPredicted RBP16.26■□□□□ 0.19
KATNA1-201ENST00000335643 PPFIBP1Q86W92 1011 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 SPATA32Q96LK8 384 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 BLZF1Q9H2G9 400 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 CUEDC2Q9H467 287 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 POMKQ9H5K3 350 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 MAN1C1Q9NR34 630 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 SLC38A7Q9NVC3 462 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 SSX2IPQ9Y2D8 614 aa16.26■□□□□ 0.19
KATNA1-201ENST00000335643 A0A1B0GVL5 298 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms