RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 IZUMO3Q5VZ72 239 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ZCCHC17Q9NP64 241 aaKnown RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 IARS2Q9NSE4 1012 aaKnown RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 TNFAIP8O95379 198 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 YWHABP31946 246 aaKnown RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 TUBA4AP68366 448 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 GPATCH4Q5T3I0 446 aaKnown RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 LPCAT2Q7L5N7 544 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ZCCHC7Q8N3Z6 543 aaKnown RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 KIF2BQ8N4N8 673 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 TGFBRAP1Q8WUH2 860 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ANKRD7Q92527 254 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 PAGE5Q96GU1 130 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ROPN1BQ9BZX4 212 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ROPN1Q9HAT0 212 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ZC3H7BQ9UGR2 993 aaKnown RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ATP6V1HQ9UI12 483 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 RCOR1Q9UKL0 485 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 DNMT1P26358 1616 aaKnown RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 A0A0D9SFI3 127 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 NQO1P15559 274 aaKnown RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ATN1P54259 1190 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 Q4G0T1 1027 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 MIS18BP1Q6P0N0 1132 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 C16orf62Q7Z3J2 963 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ADAMTS1Q9UHI8 967 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 F8VZ95 297 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 JAK1P23458 1154 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 GJA8P48165 433 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 C21orf59P57076 290 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 RNF219Q5W0B1 726 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 SCUBE1Q8IWY4 988 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 LCORLQ8N3X6 602 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 RIN3Q8TB24 985 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ACAP3Q96P50 834 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 DAPK2Q9UIK4 370 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 TNNQ9UQP3 1299 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ARHGEF10O15013 1369 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ESYT3A0FGR9 886 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 BTBD18B2RXH4 712 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 VWA5AO00534 786 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 PRPF4O43172 522 aaKnown RBP eCLIP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 LINC00301Q8NCQ3 95 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 MNTQ99583 582 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 CARD14Q9BXL6 1004 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 CYP19A1P11511 503 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 NCKAP1LP55160 1127 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ADARP55265 1226 aaKnown RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 KCNK10P57789 538 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 PLIN5Q00G26 463 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 PTGISQ16647 500 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 RUNDC3AQ59EK9 446 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 KRT35Q92764 455 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ABCC4O15439 1325 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 GFPT1Q06210 699 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-201ENST00000335551 ATP1A4Q13733 1029 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 PMF1Q6P1K2 205 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 VPS37AQ8NEZ2 397 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 SYNCRIPO60506 623 aaKnown RBP6.47□□□□□ -1.37
CSMD1-201ENST00000335551 RRM2P31350 389 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 SLC1A1P43005 524 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 SCTRP47872 440 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 VSNL1P62760 191 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 ANKRD49Q8WVL7 239 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 FAR2Q96K12 515 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 STK32BQ9NY57 414 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 AHCYL1O43865 530 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 STAT5AP42229 794 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 MAPKAPK2P49137 400 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 STAT5BP51692 787 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 EIF4A2Q14240 407 aaKnown RBP6.47□□□□□ -1.37
CSMD1-201ENST00000335551 LLGL1Q15334 1064 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 STX12Q86Y82 276 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 RHOT1Q8IXI2 618 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 ZNF579Q8NAF0 562 aaKnown RBP6.47□□□□□ -1.37
CSMD1-201ENST00000335551 MCM8Q9UJA3 840 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 LMTK3Q96Q04 1460 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 CBFA2T3O75081 653 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 PHF2O75151 1096 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 OSBPP22059 807 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 MTTPP55157 894 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 NCALDP61601 193 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 LGALS3BPQ08380 585 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 TRAPPC3LQ5T215 181 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 ZBTB38Q8NAP3 1195 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-201ENST00000335551 JADE3Q92613 823 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 NMD3Q96D46 503 aaKnown RBP6.47□□□□□ -1.37
CSMD1-201ENST00000335551 WNK4Q96J92 1243 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 CD248Q9HCU0 757 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 HEY1Q9Y5J3 304 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 A0A1W2PRG6 482 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 ZNF197O14709 1029 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 FKBP9O95302 570 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 PABPC4Q13310 644 aaKnown RBP eCLIP6.47□□□□□ -1.37
CSMD1-201ENST00000335551 TCIRG1Q13488 830 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 OASLQ15646 514 aaKnown RBP6.47□□□□□ -1.37
CSMD1-201ENST00000335551 DGUOKQ16854 277 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 FKBP9P1Q75LS8 142 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 FBXO11Q86XK2 927 aa6.47□□□□□ -1.37
CSMD1-201ENST00000335551 EEF2KMTQ96G04 330 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms