RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 NKRFO15226 690 aaKnown RBP eCLIP15.9■□□□□ 0.14
C9orf47-201ENST00000334490 ZNF286BP0CG31 522 aa15.9■□□□□ 0.14
C9orf47-201ENST00000334490 SKIP12755 728 aa15.9■□□□□ 0.14
C9orf47-201ENST00000334490 GNL1P36915 607 aaPredicted RBP15.9■□□□□ 0.14
C9orf47-201ENST00000334490 SULT1E1P49888 294 aa15.9■□□□□ 0.14
C9orf47-201ENST00000334490 ERVK-9P63128 1117 aa15.9■□□□□ 0.14
C9orf47-201ENST00000334490 ERVK-24P63145 666 aa15.9■□□□□ 0.14
C9orf47-201ENST00000334490 GABPB1Q06547 395 aaPredicted RBP15.9■□□□□ 0.14
C9orf47-201ENST00000334490 SPATA24Q86W54 205 aa15.9■□□□□ 0.14
C9orf47-201ENST00000334490 TRIM42Q8IWZ5 723 aa15.9■□□□□ 0.14
C9orf47-201ENST00000334490 PLEKHA5Q9HAU0 1116 aa15.9■□□□□ 0.14
C9orf47-201ENST00000334490 P4HA2O15460 535 aa15.89■□□□□ 0.14
C9orf47-201ENST00000334490 SETD4Q9NVD3 440 aa15.89■□□□□ 0.14
C9orf47-201ENST00000334490 SSU72P8A0A1W2PR75 194 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 GRAP2O75791 330 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 BFSP2Q13515 415 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 GLE1Q53GS7 698 aaKnown RBP15.89■□□□□ 0.13
C9orf47-201ENST00000334490 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.89■□□□□ 0.13
C9orf47-201ENST00000334490 HDAC6Q9UBN7 1215 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 PPP1R3GB7ZBB8 358 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 INSRRP14616 1297 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 CA4P22748 312 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 TPI1P60174 286 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 NR1I3Q14994 352 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 PID1Q7Z2X4 250 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 CBWD2Q8IUF1 395 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 ANKS1AQ92625 1134 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 ASIC4Q96FT7 647 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 A1CFQ9NQ94 594 aaKnown RBP15.89■□□□□ 0.13
C9orf47-201ENST00000334490 LSM7Q9UK45 103 aaKnown RBP15.89■□□□□ 0.13
C9orf47-201ENST00000334490 PI4K2BG5E9Z4 385 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 KRT37O76014 449 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 CYBBP04839 570 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 ZFXP17010 805 aaPredicted RBP15.89■□□□□ 0.13
C9orf47-201ENST00000334490 SERPINB6P35237 376 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 PNPLA4P41247 253 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 IRX4P78413 519 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 ROR1Q01973 937 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 GIT2Q14161 759 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 KRT33BQ14525 404 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 ZNF235Q14590 738 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 CDKL3Q8IVW4 592 aaPredicted RBP15.89■□□□□ 0.13
C9orf47-201ENST00000334490 BFARQ9NZS9 450 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 FIS1Q9Y3D6 152 aa15.89■□□□□ 0.13
C9orf47-201ENST00000334490 IQANK1A0A1B0GTG1 560 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 C2CD2LO14523 706 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 TOM1L1O75674 476 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 ALDH5A1P51649 535 aaPredicted RBP15.88■□□□□ 0.13
C9orf47-201ENST00000334490 ITPRIPL1Q6GPH6 555 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 EMBQ6PCB8 327 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 C1orf54Q8WWF1 131 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 UVRAGQ9P2Y5 699 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 NOVA2Q9UNW9 492 aaKnown RBP15.88■□□□□ 0.13
C9orf47-201ENST00000334490 A0A087WZ62 844 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 DFFAO00273 331 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 YY1P25490 414 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 KRT17Q04695 432 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 GPS1Q13098 491 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 EPC2Q52LR7 807 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 DDX50Q9BQ39 737 aaKnown RBP15.88■□□□□ 0.13
C9orf47-201ENST00000334490 FDXACB1Q9BRP7 624 aaPredicted RBP15.88■□□□□ 0.13
C9orf47-201ENST00000334490 PPIL2Q13356 520 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 MMEL1Q495T6 779 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 GPAT2Q6NUI2 795 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 TRPM4Q8TD43 1214 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 ATP8B4Q8TF62 1192 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 MAGEB5Q9BZ81 275 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 DPP3Q9NY33 737 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 CSDE1O75534 798 aaKnown RBP15.88■□□□□ 0.13
C9orf47-201ENST00000334490 CHRNA3P32297 505 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 SLC1A1P43005 524 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 PAPOLAP51003 745 aaKnown RBP15.88■□□□□ 0.13
C9orf47-201ENST00000334490 EIF3BP55884 814 aaKnown RBP15.88■□□□□ 0.13
C9orf47-201ENST00000334490 JADE1Q6IE81 842 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 MPZL3Q6UWV2 235 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 SPDYE1Q8NFV5 336 aaPredicted RBP15.88■□□□□ 0.13
C9orf47-201ENST00000334490 UBA3Q8TBC4 463 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 OSMRQ99650 979 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 CBWD1Q9BRT8 395 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 ABCB6Q9NP58 842 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 KLHL11Q9NVR0 708 aa15.88■□□□□ 0.13
C9orf47-201ENST00000334490 SMIM22K7EJ46 135 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 KPNA6O60684 536 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 CALRP27797 417 aaKnown RBP15.87■□□□□ 0.13
C9orf47-201ENST00000334490 GTF2H1P32780 548 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 KLC3Q6P597 504 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 KBTBD4Q9NVX7 518 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 EHD2Q9NZN4 543 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 BCAP29Q9UHQ4 241 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 TRIM17Q9Y577 477 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 ZC3H4Q9UPT8 1303 aaKnown RBP15.87■□□□□ 0.13
C9orf47-201ENST00000334490 EXT2Q93063 718 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 ALKBH8Q96BT7 664 aaKnown RBP15.87■□□□□ 0.13
C9orf47-201ENST00000334490 MCEEQ96PE7 176 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 ATP11BQ9Y2G3 1177 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 MYO5BQ9ULV0 1848 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 FAM86B1E9PN63 330 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 FAM86B2P0C5J1 330 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 SLURP2P0DP57 97 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 AKR1A1P14550 325 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms