RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 DNAJB3Q8WWF6 145 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 MAGOHBQ96A72 148 aaKnown RBP12.62□□□□□ -0.39
HDAC6-201ENST00000334136 PLCB1Q9NQ66 1216 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 LCMT1Q9UIC8 334 aa12.62□□□□□ -0.39
HDAC6-201ENST00000334136 CCNE2O96020 404 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 SMPD1P17405 629 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 PLPPR4Q7Z2D5 763 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 MCUR1Q96AQ8 359 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 KLHL29Q96CT2 875 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 NT5C1BQ96P26 610 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 HSD17B14Q9BPX1 270 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 SLC24A3Q9HC58 644 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 L1RE1Q9UN81 338 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 GABRQQ9UN88 632 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 CASZ1Q86V15 1759 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 OPLAHO14841 1288 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 RPLP2P05387 115 aaKnown RBP12.61□□□□□ -0.39
HDAC6-201ENST00000334136 IRAK1P51617 712 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 ZNF792Q3KQV3 632 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 TMEM119Q4V9L6 283 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 C4orf32Q8N8J7 132 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 MSANTD4Q8NCY6 345 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 CEP63Q96MT8 703 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 GPR20Q99678 358 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 DAAM1Q9Y4D1 1078 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 PPME1Q9Y570 386 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 QSER1Q2KHR3 1735 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 EIF4E1BA6NMX2 242 aaKnown RBP12.61□□□□□ -0.39
HDAC6-201ENST00000334136 NAMPTP43490 491 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 NPTX2P47972 431 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 CCDC38Q502W7 563 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 LENG1Q96BZ8 264 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-201ENST00000334136 ARHGAP39Q9C0H5 1083 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 BLOC1S4Q9NUP1 217 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 FER1L6Q2WGJ9 1857 aa12.61□□□□□ -0.39
HDAC6-201ENST00000334136 NRCAMQ92823 1304 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 A0A087WZ62 844 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 LRRIQ3A6PVS8 624 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-201ENST00000334136 IL17AQ16552 155 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 HHATQ5VTY9 493 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 ABHD15Q6UXT9 468 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 MS4A14Q96JA4 679 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 FDXACB1Q9BRP7 624 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-201ENST00000334136 VAV3Q9UKW4 847 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 ANO9A1A5B4 782 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 CDR2LQ86X02 465 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-201ENST00000334136 ADSSL1Q8N142 457 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 ELAC2Q9BQ52 826 aaKnown RBP12.6□□□□□ -0.39
HDAC6-201ENST00000334136 MTIF3Q9H2K0 278 aaKnown RBP12.6□□□□□ -0.39
HDAC6-201ENST00000334136 NXF1Q9UBU9 619 aaKnown RBP12.6□□□□□ -0.39
HDAC6-201ENST00000334136 LRRN2O75325 713 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 IFNB1P01574 187 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 GBP1P32455 592 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 SEC24CP53992 1094 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 MESDQ14696 234 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 PTGISQ16647 500 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 ATF7IP2Q5U623 682 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 FOXR1Q6PIV2 292 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 VPS52Q8N1B4 723 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 GPD1LQ8N335 351 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 RNF10Q8N5U6 811 aaKnown RBP12.6□□□□□ -0.39
HDAC6-201ENST00000334136 WHAMMQ8TF30 809 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 OSMRQ99650 979 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 DDX47Q9H0S4 455 aaKnown RBP12.6□□□□□ -0.39
HDAC6-201ENST00000334136 RBAKQ9NYW8 714 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-201ENST00000334136 DDX20Q9UHI6 824 aaKnown RBP12.6□□□□□ -0.39
HDAC6-201ENST00000334136 HPCAL4Q9UM19 191 aa12.6□□□□□ -0.39
HDAC6-201ENST00000334136 LAMTOR4Q0VGL1 99 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 PLCB4Q15147 1175 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 TSNAXIP1Q2TAA8 658 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 ANKRD40Q6AI12 368 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 CCNI2Q6ZMN8 369 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-201ENST00000334136 CTU1Q7Z7A3 348 aaKnown RBP12.59□□□□□ -0.39
HDAC6-201ENST00000334136 DPF3Q92784 378 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 ACAP3Q96P50 834 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 DNAJC17Q9NVM6 304 aaKnown RBP12.59□□□□□ -0.39
HDAC6-201ENST00000334136 RPTORQ8N122 1335 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 A0A087X0B3 334 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 HMGB1P1B2RPK0 211 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-201ENST00000334136 M0R2N6 131 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 MMP3P08254 477 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 KIAA1841Q6NSI8 718 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 ELOA2Q8IYF1 753 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-201ENST00000334136 TBK1Q9UHD2 729 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.59□□□□□ -0.39
HDAC6-201ENST00000334136 CSDE1O75534 798 aaKnown RBP12.59□□□□□ -0.39
HDAC6-201ENST00000334136 ACOT2P49753 483 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 MAGOHP61326 146 aaKnown RBP12.59□□□□□ -0.39
HDAC6-201ENST00000334136 MYO1EQ12965 1108 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 ALKBH5Q6P6C2 394 aaKnown RBP12.59□□□□□ -0.39
HDAC6-201ENST00000334136 LRRC31Q6UY01 552 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 TAB3Q8N5C8 712 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-201ENST00000334136 HVCN1Q96D96 273 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 PSD3Q9NYI0 1048 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 EHD2Q9NZN4 543 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 TBX20Q9UMR3 447 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 DOCK2Q92608 1830 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 EIF3DO15371 548 aaKnown RBP eCLIP12.59□□□□□ -0.39
HDAC6-201ENST00000334136 GFPT2O94808 682 aa12.59□□□□□ -0.39
HDAC6-201ENST00000334136 SMIM10L2AP0DMW4 78 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms