RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PARP2Q9UGN5 583 aa13.17□□□□□ -0.3
VPS33B-201ENST00000333371 CFHP08603 1231 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 CETPP11597 493 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 CNGA1P29973 690 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 GJC1P36383 396 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 ITGA8P53708 1063 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 MFAP3P55082 362 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 GSCP56915 257 aaPredicted RBP13.16□□□□□ -0.3
VPS33B-201ENST00000333371 MTMR1Q13613 665 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 MYBPC2Q14324 1141 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 SLMAPQ14BN4 828 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 TCEAL1Q15170 157 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 SLC39A4Q6P5W5 647 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 VSTM1Q6UX27 236 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 ANKS4BQ8N8V4 417 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 TAAR1Q96RJ0 339 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 RAVER2Q9HCJ3 691 aaKnown RBP13.16□□□□□ -0.3
VPS33B-201ENST00000333371 BAIAP2L1Q9UHR4 511 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 P4HA2O15460 535 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 ASAP2O43150 1006 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 PLA2G6O60733 806 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 UBOX5O94941 541 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 GJB6O95452 261 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 GGPS1O95749 300 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 CCNE2O96020 404 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 CLTAP09496 248 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 RRM1P23921 792 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 MAPK4P31152 587 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 HSD17B4P51659 736 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 KRT39Q6A163 491 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 TRPM8Q7Z2W7 1104 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 PNMA8AQ86V59 439 aaPredicted RBP13.16□□□□□ -0.3
VPS33B-201ENST00000333371 CLEC4DQ8WXI8 215 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 POMGNT1Q8WZA1 660 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 ZBED3Q96IU2 234 aaPredicted RBP13.16□□□□□ -0.3
VPS33B-201ENST00000333371 LRRC19Q9H756 370 aa13.16□□□□□ -0.3
VPS33B-201ENST00000333371 DENND3A2RUS2 1198 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 IVDP26440 423 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 NPTX2P47972 431 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 CLUL1Q15846 466 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 ZNF568Q3ZCX4 644 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 SV2AQ7L0J3 742 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 C12orf56Q8IXR9 622 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 TMEM161BQ8NDZ6 487 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 RAB20Q9NX57 234 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 TBX20Q9UMR3 447 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 DNAJC8O75937 253 aaPredicted RBP13.15□□□□□ -0.3
VPS33B-201ENST00000333371 SP4Q02446 784 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 NUGGCQ68CJ6 796 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 SPOPLQ6IQ16 392 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 ACAD10Q6JQN1 1059 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 CYFIP1Q7L576 1253 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 ANKS1BQ7Z6G8 1248 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 PASD1Q8IV76 773 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 NT5C1BQ96P26 610 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 MYCBPQ99417 103 aaPredicted RBP13.15□□□□□ -0.3
VPS33B-201ENST00000333371 KLHL11Q9NVR0 708 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 SLC12A4Q9UP95 1085 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 KIAA1217Q5T5P2 1943 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 MROH7Q68CQ1 1323 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 ADGRA3Q8IWK6 1321 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 FER1L6Q2WGJ9 1857 aa13.15□□□□□ -0.3
VPS33B-201ENST00000333371 FSCN2O14926 492 aa13.15□□□□□ -0.31
VPS33B-201ENST00000333371 SNX3O60493 162 aa13.15□□□□□ -0.31
VPS33B-201ENST00000333371 GHRP10912 638 aa13.15□□□□□ -0.31
VPS33B-201ENST00000333371 SCP2P22307 547 aa13.15□□□□□ -0.31
VPS33B-201ENST00000333371 NCKAP1LP55160 1127 aa13.15□□□□□ -0.31
VPS33B-201ENST00000333371 WNT7BP56706 349 aa13.15□□□□□ -0.31
VPS33B-201ENST00000333371 KCNJ2P63252 427 aa13.15□□□□□ -0.31
VPS33B-201ENST00000333371 RHBDF2Q6PJF5 856 aa13.15□□□□□ -0.31
VPS33B-201ENST00000333371 FBXL13Q8NEE6 735 aa13.15□□□□□ -0.31
VPS33B-201ENST00000333371 C9orf72Q96LT7 481 aa13.15□□□□□ -0.31
VPS33B-201ENST00000333371 TMEM109Q9BVC6 243 aa13.15□□□□□ -0.31
VPS33B-201ENST00000333371 GJA3Q9Y6H8 435 aa13.15□□□□□ -0.31
VPS33B-201ENST00000333371 MGRN1O60291 552 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 CLEC16AQ2KHT3 1053 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 PREPLQ4J6C6 727 aaPredicted RBP13.14□□□□□ -0.31
VPS33B-201ENST00000333371 HP1BP3Q5SSJ5 553 aaPredicted RBP13.14□□□□□ -0.31
VPS33B-201ENST00000333371 ANO5Q75V66 913 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 CCDC50Q8IVM0 306 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 KIF2BQ8N4N8 673 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 CCDC63Q8NA47 563 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 C12orf50Q8NA57 414 aaPredicted RBP13.14□□□□□ -0.31
VPS33B-201ENST00000333371 THOC1Q96FV9 657 aaKnown RBP13.14□□□□□ -0.31
VPS33B-201ENST00000333371 UVRAGQ9P2Y5 699 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 PGAP2Q9UHJ9 254 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 PNMA3Q9UL41 463 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 CTDP1Q9Y5B0 961 aaPredicted RBP13.14□□□□□ -0.31
VPS33B-201ENST00000333371 MYH9P35579 1960 aaKnown RBP13.14□□□□□ -0.31
VPS33B-201ENST00000333371 TESPA1A2RU30 521 aaPredicted RBP13.14□□□□□ -0.31
VPS33B-201ENST00000333371 ATP6V1G2O95670 118 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 ICAM1P05362 532 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 PTGER2P43116 358 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 ITIH4Q14624 930 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 ACCSLQ4AC99 568 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 SCARA3Q6AZY7 606 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 MFSD5Q6N075 450 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 TAOK1Q7L7X3 1001 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 SYTL5Q8TDW5 730 aaPredicted RBP13.14□□□□□ -0.31
VPS33B-201ENST00000333371 FAM213AQ9BRX8 229 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms