RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 ARGLU1Q9NWB6 273 aaPredicted RBP19.24■□□□□ 0.67
ACTB-201ENST00000331789 SLC10A3P09131 477 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 PPP1R13LQ8WUF5 828 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 RFFLQ8WZ73 363 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 LENG1Q96BZ8 264 aaPredicted RBP19.23■□□□□ 0.67
ACTB-201ENST00000331789 RPGRIP1Q96KN7 1286 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 NFKBIZQ9BYH8 718 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 UMODL1Q5DID0 1318 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 RTN2O75298 545 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 CST3P01034 146 aaPredicted RBP19.23■□□□□ 0.67
ACTB-201ENST00000331789 CYP2B6P20813 491 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 TMOD1P28289 359 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 CYP2C19P33261 490 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 PDE6CP51160 858 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 IRX5P78411 483 aaPredicted RBP19.23■□□□□ 0.67
ACTB-201ENST00000331789 CDR2Q01850 454 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 POU5F1BQ06416 359 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 GRM1Q13255 1194 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 SLFN11Q7Z7L1 901 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 WDR49Q8IV35 697 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 CEP120Q8N960 986 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 LMBR1Q8WVP7 490 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 DDX1Q92499 740 aaKnown RBP19.23■□□□□ 0.67
ACTB-201ENST00000331789 USP6NLQ92738 828 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 FAM81BQ96LP2 452 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 CDT1Q9H211 546 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 PRMT7Q9NVM4 692 aaPredicted RBP19.23■□□□□ 0.67
ACTB-201ENST00000331789 RNF216Q9NWF9 866 aaPredicted RBP19.23■□□□□ 0.67
ACTB-201ENST00000331789 GNEQ9Y223 722 aaKnown RBP19.23■□□□□ 0.67
ACTB-201ENST00000331789 TNFSF13BQ9Y275 285 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 NUB1Q9Y5A7 615 aa19.23■□□□□ 0.67
ACTB-201ENST00000331789 SEC31AO94979 1220 aaKnown RBP19.22■□□□□ 0.67
ACTB-201ENST00000331789 KIF4AO95239 1232 aa19.22■□□□□ 0.67
ACTB-201ENST00000331789 ZNF865P0CJ78 1059 aaPredicted RBP19.22■□□□□ 0.67
ACTB-201ENST00000331789 NCOA4Q13772 614 aa19.22■□□□□ 0.67
ACTB-201ENST00000331789 RPS6KA1Q15418 735 aa19.22■□□□□ 0.67
ACTB-201ENST00000331789 AMHR2Q16671 573 aa19.22■□□□□ 0.67
ACTB-201ENST00000331789 CCDC181Q5TID7 509 aa19.22■□□□□ 0.67
ACTB-201ENST00000331789 OLFML2BQ68BL8 750 aa19.22■□□□□ 0.67
ACTB-201ENST00000331789 ZNF572Q7Z3I7 529 aaPredicted RBP19.22■□□□□ 0.67
ACTB-201ENST00000331789 TMEM192Q8IY95 271 aa19.22■□□□□ 0.67
ACTB-201ENST00000331789 MTMR12Q9C0I1 747 aa19.22■□□□□ 0.67
ACTB-201ENST00000331789 SETD4Q9NVD3 440 aa19.22■□□□□ 0.67
ACTB-201ENST00000331789 COG5Q9UP83 839 aa19.22■□□□□ 0.67
ACTB-201ENST00000331789 STXBP5LQ9Y2K9 1186 aa19.22■□□□□ 0.67
ACTB-201ENST00000331789 GPR25O00155 361 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 CLSTN1O94985 981 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 HOXC6P09630 235 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 ACO1P21399 889 aaKnown RBP19.21■□□□□ 0.67
ACTB-201ENST00000331789 CUL2Q13617 745 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 FAM187BQ17R55 369 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 DAAM2Q86T65 1068 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 IFNLR1Q8IU57 520 aaPredicted RBP19.21■□□□□ 0.67
ACTB-201ENST00000331789 CPB2Q96IY4 423 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 RAB21Q9UL25 225 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 A6NJR5 290 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 FAM155AB1AL88 458 aaPredicted RBP19.21■□□□□ 0.67
ACTB-201ENST00000331789 BUB1BO60566 1050 aaPredicted RBP19.21■□□□□ 0.67
ACTB-201ENST00000331789 CLTAP09496 248 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 GZMAP12544 262 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 PAFAH1B1P43034 410 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 AP3M2P53677 418 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 NOP14P78316 857 aaKnown RBP19.21■□□□□ 0.67
ACTB-201ENST00000331789 TMCO3Q6UWJ1 677 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 PEX26Q7Z412 305 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 KIAA0319LQ8IZA0 1049 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 NLRP7Q8WX94 980 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 TAF4BQ92750 862 aa19.21■□□□□ 0.67
ACTB-201ENST00000331789 PASKQ96RG2 1323 aa19.2■□□□□ 0.66
ACTB-201ENST00000331789 DUOXA2Q1HG44 320 aa19.2■□□□□ 0.66
ACTB-201ENST00000331789 CC2D1AQ6P1N0 951 aaPredicted RBP19.2■□□□□ 0.66
ACTB-201ENST00000331789 NT5DC3Q86UY8 548 aa19.2■□□□□ 0.66
ACTB-201ENST00000331789 SPATA4Q8NEY3 305 aa19.2■□□□□ 0.66
ACTB-201ENST00000331789 ZFYVE28Q9HCC9 887 aa19.2■□□□□ 0.66
ACTB-201ENST00000331789 CHORDC1Q9UHD1 332 aaPredicted RBP19.2■□□□□ 0.66
ACTB-201ENST00000331789 GJD2Q9UKL4 321 aa19.2■□□□□ 0.66
ACTB-201ENST00000331789 PCDHB4Q9Y5E5 795 aa19.2■□□□□ 0.66
ACTB-201ENST00000331789 KCNK3O14649 394 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 RNASE9P60153 205 aaKnown RBP19.19■□□□□ 0.66
ACTB-201ENST00000331789 MYL6P60660 151 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 VSNL1P62760 191 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 GPC5P78333 572 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 TFAMQ00059 246 aaKnown RBP19.19■□□□□ 0.66
ACTB-201ENST00000331789 SURF1Q15526 300 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 CFAP221Q4G0U5 840 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 TLK2Q86UE8 772 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 EFCAB13Q8IY85 973 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 SYCE1Q8N0S2 351 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 MMGT1Q8N4V1 131 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 KAT2BQ92831 832 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 CCDC94Q9BW85 323 aaPredicted RBP19.19■□□□□ 0.66
ACTB-201ENST00000331789 PDZD7Q9H5P4 517 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 ATMINO43313 823 aaPredicted RBP19.19■□□□□ 0.66
ACTB-201ENST00000331789 ZEB2O60315 1214 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 CXCL8P10145 99 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 INHBEP58166 350 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 CRHR2Q13324 411 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 BRD3Q15059 726 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 SCLT1Q96NL6 688 aa19.19■□□□□ 0.66
ACTB-201ENST00000331789 ZIC5Q96T25 663 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms