RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 CLCN6P51797 869 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 TMEM62Q0P6H9 643 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 MTF1Q14872 753 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 UBXN11Q5T124 520 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 MFSD5Q6N075 450 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 CNKSR3Q6P9H4 555 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 SLC24A5Q71RS6 500 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 PARD3BQ8TEW8 1205 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 NUP58Q9BVL2 599 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 FAM53CQ9NYF3 392 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 FBXL5Q9UKA1 691 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 ATP11BQ9Y2G3 1177 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 COQ4Q9Y3A0 265 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 PDCD11Q14690 1871 aaKnown RBP10.27□□□□□ -0.77
C11orf54-201ENST00000331239 ABHD14A-ACY1A0A1B0GW23 586 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 B4GALT5O43286 388 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 MYCP01106 439 aaPredicted RBP10.27□□□□□ -0.77
C11orf54-201ENST00000331239 EDN1P05305 212 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 STAG3L1P0CL83 205 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 TRIM14Q14142 442 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 FIGNQ5HY92 759 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 ALKAL1Q6UXT8 129 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 TAF4BQ92750 862 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 SLC35C1Q96A29 364 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 ABHD8Q96I13 439 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 CGRRF1Q99675 332 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 IFIH1Q9BYX4 1025 aaKnown RBP10.27□□□□□ -0.77
C11orf54-201ENST00000331239 TRIM6Q9C030 488 aaPredicted RBP10.27□□□□□ -0.77
C11orf54-201ENST00000331239 NDST4Q9H3R1 872 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 RBAKQ9NYW8 714 aaPredicted RBP10.27□□□□□ -0.77
C11orf54-201ENST00000331239 MRFAP1Q9Y605 127 aa10.27□□□□□ -0.77
C11orf54-201ENST00000331239 TTC26A0AVF1 554 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 GYPCP04921 128 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 FAM163BP0C2L3 166 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 ATN1P54259 1190 aaPredicted RBP10.26□□□□□ -0.77
C11orf54-201ENST00000331239 PPIGQ13427 754 aaKnown RBP eCLIP10.26□□□□□ -0.77
C11orf54-201ENST00000331239 EEF1DP3Q658K8 133 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 RAD9BQ6WBX8 426 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 FNBP1Q96RU3 617 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 FAM213AQ9BRX8 229 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 HAPLN2Q9GZV7 340 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 AGO3Q9H9G7 860 aaKnown RBP10.26□□□□□ -0.77
C11orf54-201ENST00000331239 TMEM8AQ9HCN3 771 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 FAM105AQ9NUU6 356 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 SLC38A7Q9NVC3 462 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 CNTN3Q9P232 1028 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 KANSL3Q9P2N6 904 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 ANKFY1Q9P2R3 1169 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 PRKAG2Q9UGJ0 569 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 ADGRG1Q9Y653 693 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 ANK1P16157 1881 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 STAU1O95793 577 aaKnown RBP10.26□□□□□ -0.77
C11orf54-201ENST00000331239 CTSHP09668 335 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 ACTN1P12814 892 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 EN2P19622 333 aaPredicted RBP10.26□□□□□ -0.77
C11orf54-201ENST00000331239 FECHP22830 423 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 CD52P31358 61 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 CASP14P31944 242 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 CASP4P49662 377 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 BMS1Q14692 1282 aaKnown RBP10.26□□□□□ -0.77
C11orf54-201ENST00000331239 MBTPS1Q14703 1052 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 DUOXA2Q1HG44 320 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 MIIPQ5JXC2 388 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 TWF2Q6IBS0 349 aaKnown RBP10.26□□□□□ -0.77
C11orf54-201ENST00000331239 CPLX3Q8WVH0 158 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 SECISBP2LQ93073 1101 aaKnown RBP10.26□□□□□ -0.77
C11orf54-201ENST00000331239 JAKMIP2Q96AA8 810 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 ZBTB45Q96K62 511 aaPredicted RBP10.26□□□□□ -0.77
C11orf54-201ENST00000331239 PCIF1Q9H4Z3 704 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 PLCB1Q9NQ66 1216 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 GINS2Q9Y248 185 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 PCDHB2Q9Y5E7 798 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 LTBP2Q14767 1821 aa10.26□□□□□ -0.77
C11orf54-201ENST00000331239 C9IYK1 514 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 NBNO60934 754 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 NPTXRO95502 500 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 GHRP10912 638 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 KCNH2Q12809 1159 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 KRT39Q6A163 491 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 C15orf39Q6ZRI6 1047 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 ZNF598Q86UK7 904 aaKnown RBP10.25□□□□□ -0.77
C11orf54-201ENST00000331239 CPB2Q96IY4 423 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 TMEM161AQ9NX61 479 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 MYO6Q9UM54 1294 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 BRCA2P51587 3418 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 TTLL13PA6NNM8 815 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 KIF5CO60282 957 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 ITGA4P13612 1032 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 ATICP31939 592 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 FXR1P51114 621 aaKnown RBP eCLIP10.25□□□□□ -0.77
C11orf54-201ENST00000331239 NFX1Q12986 1120 aaKnown RBP10.25□□□□□ -0.77
C11orf54-201ENST00000331239 IKBKEQ14164 716 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 ENOX2Q16206 610 aaKnown RBP10.25□□□□□ -0.77
C11orf54-201ENST00000331239 TMCO3Q6UWJ1 677 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 GBP6Q6ZN66 633 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 CBWD2Q8IUF1 395 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 SNX27Q96L92 541 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 WNT8AQ9H1J5 351 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 IL23AQ9NPF7 189 aa10.25□□□□□ -0.77
C11orf54-201ENST00000331239 LZTFL1Q9NQ48 299 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms