RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 STRN3Q13033 797 aa8.4□□□□□ -1.07
VMA21-201ENST00000330374 ANO7Q6IWH7 933 aa8.4□□□□□ -1.07
VMA21-201ENST00000330374 LMNTD2Q8IXW0 634 aa8.4□□□□□ -1.07
VMA21-201ENST00000330374 BORCS6Q96GS4 357 aa8.4□□□□□ -1.07
VMA21-201ENST00000330374 HERPUD2Q9BSE4 406 aa8.4□□□□□ -1.07
VMA21-201ENST00000330374 TBC1D10AQ9BXI6 508 aa8.4□□□□□ -1.07
VMA21-201ENST00000330374 ROPN1BQ9BZX4 212 aaPredicted RBP8.4□□□□□ -1.07
VMA21-201ENST00000330374 ROPN1Q9HAT0 212 aaPredicted RBP8.4□□□□□ -1.07
VMA21-201ENST00000330374 ANAPC7Q9UJX3 599 aa8.4□□□□□ -1.07
VMA21-201ENST00000330374 CHKBQ9Y259 395 aa8.4□□□□□ -1.07
VMA21-201ENST00000330374 ROBO1Q9Y6N7 1651 aa8.4□□□□□ -1.07
VMA21-201ENST00000330374 K7ENM7 598 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 CFBP00751 764 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 KRT5P13647 590 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 HSPA6P17066 643 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 WDR4P57081 412 aaKnown RBP8.39□□□□□ -1.07
VMA21-201ENST00000330374 MTFR1Q15390 333 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 KAZNQ674X7 775 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 SLFN13Q68D06 897 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 MFSD5Q6N075 450 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 ZNF365Q70YC5 407 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 SH3GL3Q99963 347 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 RNPEPL1Q9HAU8 725 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.39□□□□□ -1.07
VMA21-201ENST00000330374 SUGT1Q9Y2Z0 365 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 EXOC1LA0A1B0GW35 172 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 AMIGO3Q86WK7 504 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 SNF8Q96H20 258 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 NPHS2Q9NP85 383 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 CPSF2Q9P2I0 782 aaKnown RBP8.39□□□□□ -1.07
VMA21-201ENST00000330374 GTPBP10A4D1E9 387 aaKnown RBP8.39□□□□□ -1.07
VMA21-201ENST00000330374 O00370 1275 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 PEX11AO75192 247 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 GDF11O95390 407 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 EYA4O95677 639 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 EEF2P13639 858 aaKnown RBP8.39□□□□□ -1.07
VMA21-201ENST00000330374 CALB2P22676 271 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 CA4P22748 312 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 HOXA7P31268 230 aaPredicted RBP8.39□□□□□ -1.07
VMA21-201ENST00000330374 PTDSS1P48651 473 aaKnown RBP8.39□□□□□ -1.07
VMA21-201ENST00000330374 SLC10A5Q5PT55 438 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 GPATCH4Q5T3I0 446 aaKnown RBP8.39□□□□□ -1.07
VMA21-201ENST00000330374 RNF220Q5VTB9 566 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 RFWD3Q6PCD5 774 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 CNBD1Q8NA66 436 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 UCMAQ8WVF2 138 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 MAGEB18Q96M61 343 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 KLF6Q99612 283 aaPredicted RBP8.39□□□□□ -1.07
VMA21-201ENST00000330374 SYT15Q9BQS2 421 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 CBWD1Q9BRT8 395 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 SYT11Q9BT88 431 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 TRIM55Q9BYV6 548 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 WNT8AQ9H1J5 351 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 VPS37BQ9H9H4 285 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 PCDHB9Q9Y5E1 797 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 PHLPP1O60346 1717 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 GOLGA8SH3BPF8 625 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 GOLGA8MH3BSY2 632 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 GOLGA8RI6L899 631 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 RRM1P23921 792 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 TAF1BQ53T94 588 aaPredicted RBP8.39□□□□□ -1.07
VMA21-201ENST00000330374 FAM182AQ5T1J6 154 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 C11orf63Q6NUN7 778 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 PPP1R18Q6NYC8 613 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 CYFIP1Q7L576 1253 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 EXOC8Q8IYI6 725 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 TEKT4Q8WW24 435 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 SAYSD1Q9NPB0 183 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 UBN1Q9NPG3 1134 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 PRKAG3Q9UGI9 489 aa8.39□□□□□ -1.07
VMA21-201ENST00000330374 SNHG28P0DPA3 235 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 NEFHP12036 1026 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 MAPK4P31152 587 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 DSG3P32926 999 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 CETN1Q12798 172 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 SIX1Q15475 284 aaPredicted RBP8.38□□□□□ -1.07
VMA21-201ENST00000330374 SLC30A9Q6PML9 568 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 DPH6Q7L8W6 267 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 ZFPM1Q8IX07 1006 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 MTMR14Q8NCE2 650 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 LRRC8CQ8TDW0 803 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 MORC4Q8TE76 937 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 STK32AQ8WU08 396 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 HAUS1Q96CS2 278 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 CCDC77Q9BR77 488 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 TMEM109Q9BVC6 243 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 ZNF335Q9H4Z2 1342 aaPredicted RBP8.38□□□□□ -1.07
VMA21-201ENST00000330374 FAM47DPA6NHR8 397 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 MAPK13O15264 365 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 GAS8O95995 478 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 TPBGLP0DKB5 382 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 BMP3P12645 472 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 ALAS1P13196 640 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 POLGP54098 1239 aaPredicted RBP8.38□□□□□ -1.07
VMA21-201ENST00000330374 INHBEP58166 350 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 NFIAQ12857 509 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 KIF22Q14807 665 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 HHATQ5VTY9 493 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 IZUMO3Q5VZ72 239 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 ARMC3Q5W041 872 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms