RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 VTNP04004 478 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 MMEP08473 750 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 IQCF3P0C7M6 154 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 GZMAP12544 262 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 NCOA4Q13772 614 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 RPS6KA1Q15418 735 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 MARCH8Q5T0T0 291 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 CCDC181Q5TID7 509 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 THNSL1Q8IYQ7 743 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 SYCE1Q8N0S2 351 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 FAM212AQ96EL1 285 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 PPP1R16BQ96T49 567 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 CDT1Q9H211 546 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 APOBEC3GQ9HC16 384 aaKnown RBP16.05■□□□□ 0.16
TPM3-205ENST00000328159 ZFYVE28Q9HCC9 887 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 PACSIN2Q9UNF0 486 aaPredicted RBP16.05■□□□□ 0.16
TPM3-205ENST00000328159 GNEQ9Y223 722 aaKnown RBP16.05■□□□□ 0.16
TPM3-205ENST00000328159 PASKQ96RG2 1323 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 KIF4AO95239 1232 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 CLTAP09496 248 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 ZNF865P0CJ78 1059 aaPredicted RBP16.05■□□□□ 0.16
TPM3-205ENST00000328159 ITIH3Q06033 890 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 CUL2Q13617 745 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 CCL14Q16627 93 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 AMHR2Q16671 573 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 CDR2LQ86X02 465 aaPredicted RBP16.05■□□□□ 0.16
TPM3-205ENST00000328159 DDX1Q92499 740 aaKnown RBP16.05■□□□□ 0.16
TPM3-205ENST00000328159 TAF4BQ92750 862 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 GOLPH3Q9H4A6 298 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 OSGEPQ9NPF4 335 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 RNF14Q9UBS8 474 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 FAM170AA1A519 330 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 RRN3P2A6NIE6 340 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 ZEB2O60315 1214 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 CYP2B6P20813 491 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 TBXAS1P24557 533 aaPredicted RBP16.04■□□□□ 0.16
TPM3-205ENST00000328159 CYP2C19P33261 490 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 RGS2P41220 211 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 PAFAH1B1P43034 410 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 DNA2P51530 1060 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 C2orf54Q08AI8 447 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 BRD3Q15059 726 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 TCEAL1Q15170 157 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 DUOXA2Q1HG44 320 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 OLFML2BQ68BL8 750 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 TMCO3Q6UWJ1 677 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 RHOT2Q8IXI1 618 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 NLRP7Q8WX94 980 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 PNKPQ96T60 521 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 ZNF446Q9NWS9 450 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 EHD2Q9NZN4 543 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 RAB21Q9UL25 225 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 STXBP5LQ9Y2K9 1186 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 NUB1Q9Y5A7 615 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 TLL2Q9Y6L7 1015 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 MGAMO43451 1857 aa16.04■□□□□ 0.16
TPM3-205ENST00000328159 FAM155AB1AL88 458 aaPredicted RBP16.03■□□□□ 0.16
TPM3-205ENST00000328159 MCF2P10911 925 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 ACO1P21399 889 aaKnown RBP16.03■□□□□ 0.16
TPM3-205ENST00000328159 BPIFB4P59827 614 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 OSTNP61366 133 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 NOP14P78316 857 aaKnown RBP16.03■□□□□ 0.16
TPM3-205ENST00000328159 GPC5P78333 572 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 CFAP221Q4G0U5 840 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 PEX26Q7Z412 305 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 DAAM2Q86T65 1068 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 KIAA0319LQ8IZA0 1049 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 MMGT1Q8N4V1 131 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 CEP120Q8N960 986 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 IMPG2Q9BZV3 1241 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 MTMR12Q9C0I1 747 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 SETD4Q9NVD3 440 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 SMARCAL1Q9NZC9 954 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 GPR25O00155 361 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 CES2O00748 559 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 B4GALT4O60513 344 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 BUB1BO60566 1050 aaPredicted RBP16.03■□□□□ 0.16
TPM3-205ENST00000328159 CSDE1O75534 798 aaKnown RBP16.03■□□□□ 0.16
TPM3-205ENST00000328159 CLSTN1O94985 981 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 ASS1P00966 412 aaKnown RBP16.03■□□□□ 0.16
TPM3-205ENST00000328159 HADHBP55084 474 aaKnown RBP16.03■□□□□ 0.16
TPM3-205ENST00000328159 SREBF2Q12772 1141 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 TLK2Q86UE8 772 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 NT5DC3Q86UY8 548 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 ZNF677Q86XU0 584 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 SPATA4Q8NEY3 305 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 SOCS4Q8WXH5 440 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 MS4A14Q96JA4 679 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 CALR3Q96L12 384 aaKnown RBP16.03■□□□□ 0.16
TPM3-205ENST00000328159 SCLT1Q96NL6 688 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 APBA2Q99767 749 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 PDZD7Q9H5P4 517 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 RPF1Q9H9Y2 349 aaKnown RBP16.03■□□□□ 0.16
TPM3-205ENST00000328159 GJD2Q9UKL4 321 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 COG5Q9UP83 839 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 PCDHB4Q9Y5E5 795 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 PCDHB2Q9Y5E7 798 aa16.03■□□□□ 0.16
TPM3-205ENST00000328159 UMODL1Q5DID0 1318 aa16.02■□□□□ 0.16
TPM3-205ENST00000328159 CCDC151A5D8V7 595 aa16.02■□□□□ 0.15
TPM3-205ENST00000328159 DCAF8L1A6NGE4 600 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms