RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 DSG1Q02413 1049 aa6.66□□□□□ -1.34
SSH1-202ENST00000326495 NECTIN1Q15223 517 aa6.66□□□□□ -1.34
SSH1-202ENST00000326495 RDM1Q8NG50 284 aa6.66□□□□□ -1.34
SSH1-202ENST00000326495 STK32BQ9NY57 414 aa6.66□□□□□ -1.34
SSH1-202ENST00000326495 ZNF804BA4D1E1 1349 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 TRPC5OSA6NMA1 111 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 ABLIM1O14639 778 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 TRAPPC3O43617 180 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 IFNA14P01570 189 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 PRR29P0C7W0 189 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 KCNA3P22001 575 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 OSBPP22059 807 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 RGS4P49798 205 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 PREPLQ4J6C6 727 aaPredicted RBP6.65□□□□□ -1.34
SSH1-202ENST00000326495 C1orf228Q6PIY5 440 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 SPDYE1Q8NFV5 336 aaPredicted RBP6.65□□□□□ -1.34
SSH1-202ENST00000326495 SNIP1Q8TAD8 396 aaKnown RBP6.65□□□□□ -1.34
SSH1-202ENST00000326495 FAM210AQ96ND0 272 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 NRDE2Q9H7Z3 1164 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 GPS1Q13098 491 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 ZNF589Q86UQ0 364 aaPredicted RBP6.65□□□□□ -1.34
SSH1-202ENST00000326495 GMEB1Q9Y692 573 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 PCM1Q15154 2024 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 A0A1W2PQJ5 194 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 NCAM2O15394 837 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 KCTD2Q14681 263 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 KRT72Q14CN4 511 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 TRIM71Q2Q1W2 868 aaKnown RBP6.65□□□□□ -1.34
SSH1-202ENST00000326495 SLFN13Q68D06 897 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 SPATA21Q7Z572 469 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 MCUQ8NE86 351 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 PI4K2BQ8TCG2 481 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 WDR60Q8WVS4 1066 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 DNAJC9Q8WXX5 260 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 IRAK4Q9NWZ3 460 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 SHROOM3Q8TF72 1996 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 A0A1B0GTH6 734 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 CD2BP2O95400 341 aaKnown RBP6.65□□□□□ -1.34
SSH1-202ENST00000326495 STAG2Q8N3U4 1231 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 FAM149B1Q96BN6 582 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 VPS50Q96JG6 964 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 ZNF560Q96MR9 790 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 CDK5RAP1Q96SZ6 601 aaKnown RBP6.65□□□□□ -1.34
SSH1-202ENST00000326495 CHRAC1Q9NRG0 131 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 ATP11BQ9Y2G3 1177 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 NDUFB9Q9Y6M9 179 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 KDM6AO15550 1401 aaPredicted RBP6.65□□□□□ -1.34
SSH1-202ENST00000326495 C1DQ13901 141 aaKnown RBP6.65□□□□□ -1.34
SSH1-202ENST00000326495 ULK2Q8IYT8 1036 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 ASB2Q96Q27 587 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 ADGRG1Q9Y653 693 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 CFAP99D6REC4 459 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 K7ERI5 159 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 COBLO75128 1261 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 MAPRE1Q15691 268 aaKnown RBP6.65□□□□□ -1.34
SSH1-202ENST00000326495 BTNL9Q6UXG8 535 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 TTC30AQ86WT1 665 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 TTC30BQ8N4P2 665 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 ARL8AQ96BM9 186 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 CCSER1Q9C0I3 900 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 TUFT1Q9NNX1 390 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 HERC5Q9UII4 1024 aaKnown RBP6.65□□□□□ -1.34
SSH1-202ENST00000326495 TSC22D4Q9Y3Q8 395 aa6.65□□□□□ -1.34
SSH1-202ENST00000326495 SPDYE2BA6NHP3 402 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 A8MXQ7 604 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 CES2O00748 559 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 SPDYE6P0CI01 402 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 RGS2P41220 211 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 BTDP43251 543 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 ACADSBP45954 432 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 EZH2Q15910 746 aaKnown RBP6.65□□□□□ -1.35
SSH1-202ENST00000326495 TMEM259Q4ZIN3 620 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 DDX42Q86XP3 938 aaKnown RBP eCLIP6.65□□□□□ -1.35
SSH1-202ENST00000326495 FMR1NBQ8N0W7 255 aaPredicted RBP6.65□□□□□ -1.35
SSH1-202ENST00000326495 CMTR1Q8N1G2 835 aaKnown RBP6.65□□□□□ -1.35
SSH1-202ENST00000326495 BEST2Q8NFU1 509 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 TNIP3Q96KP6 325 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 BRD8Q9H0E9 1235 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 RIC8BQ9NVN3 520 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 ADAM22Q9P0K1 906 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 METP08581 1390 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 PHKA2P46019 1235 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 CARSP49589 748 aaKnown RBP6.65□□□□□ -1.35
SSH1-202ENST00000326495 TCP10Q12799 353 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 HEATR6Q6AI08 1181 aaKnown RBP6.65□□□□□ -1.35
SSH1-202ENST00000326495 TMEM179Q6ZVK1 233 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 ELMOD1Q8N336 334 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 UBE2OQ9C0C9 1292 aaKnown RBP6.65□□□□□ -1.35
SSH1-202ENST00000326495 ZWILCHQ9H900 591 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 SLC24A3Q9HC58 644 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 PDS5AQ29RF7 1337 aaKnown RBP6.65□□□□□ -1.35
SSH1-202ENST00000326495 NUP205Q92621 2012 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 PHF2O75151 1096 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 VHLP40337 213 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 SLC12A1Q13621 1099 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 ARL10Q8N8L6 244 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 CARD9Q9H257 536 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 OLA1Q9NTK5 396 aaKnown RBP6.65□□□□□ -1.35
SSH1-202ENST00000326495 CCT8L1PA6NM43 557 aa6.65□□□□□ -1.35
SSH1-202ENST00000326495 CAPN15O75808 1086 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms