RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 C2orf40Q9H1Z8 148 aa10.21□□□□□ -0.77
COL12A1-201ENST00000322507 EMILIN3Q9NT22 766 aa10.21□□□□□ -0.77
COL12A1-201ENST00000322507 FRMPD1Q5SYB0 1578 aa10.21□□□□□ -0.77
COL12A1-201ENST00000322507 COPEO14579 308 aa10.21□□□□□ -0.77
COL12A1-201ENST00000322507 VBP1P61758 197 aa10.21□□□□□ -0.77
COL12A1-201ENST00000322507 RBL2Q08999 1139 aa10.21□□□□□ -0.77
COL12A1-201ENST00000322507 FGD2Q7Z6J4 655 aa10.21□□□□□ -0.77
COL12A1-201ENST00000322507 C20orf96Q9NUD7 363 aaPredicted RBP10.21□□□□□ -0.77
COL12A1-201ENST00000322507 NFU1Q9UMS0 254 aa10.21□□□□□ -0.77
COL12A1-201ENST00000322507 EPM2AIP1Q7L775 607 aaPredicted RBP10.21□□□□□ -0.77
COL12A1-201ENST00000322507 NSUN7Q8NE18 718 aaKnown RBP10.21□□□□□ -0.77
COL12A1-201ENST00000322507 BBS2Q9BXC9 721 aa10.21□□□□□ -0.77
COL12A1-201ENST00000322507 STAP1Q9ULZ2 295 aa10.21□□□□□ -0.77
COL12A1-201ENST00000322507 H0Y3Z8 333 aa10.21□□□□□ -0.77
COL12A1-201ENST00000322507 ADARP55265 1226 aaKnown RBP10.21□□□□□ -0.77
COL12A1-201ENST00000322507 KCNV1Q6PIU1 500 aa10.21□□□□□ -0.77
COL12A1-201ENST00000322507 TTC29Q8NA56 475 aaPredicted RBP10.21□□□□□ -0.77
COL12A1-201ENST00000322507 CEP95Q96GE4 821 aa10.21□□□□□ -0.77
COL12A1-201ENST00000322507 ZC3H10Q96K80 434 aaKnown RBP10.21□□□□□ -0.77
COL12A1-201ENST00000322507 ADNPQ9H2P0 1102 aa10.21□□□□□ -0.77
COL12A1-201ENST00000322507 TAS2R42Q7RTR8 314 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 MICU2Q8IYU8 434 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 RMDN1Q96DB5 314 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 FAM187AA6NFU0 413 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 HDLBPQ00341 1268 aaKnown RBP10.21□□□□□ -0.78
COL12A1-201ENST00000322507 ARMC6Q6NXE6 501 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 MAGED4Q96JG8 741 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 FAM20AQ96MK3 541 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 TSSK1BQ9BXA7 367 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 HACD3Q9P035 362 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 PSTPIP1O43586 416 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 RAB25P57735 213 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 ZYXQ15942 572 aaKnown RBP10.21□□□□□ -0.78
COL12A1-201ENST00000322507 ARMC4Q5T2S8 1044 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 PCNX4Q63HM2 1172 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 KIAA1841Q6NSI8 718 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 KRT27Q7Z3Y8 459 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 TALDO1P37837 337 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 DMC1Q14565 340 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 CCNYQ8ND76 341 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 CEP170P1Q96L14 293 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 TRAPPC9Q96Q05 1148 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 CEP44Q9C0F1 390 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 SLAIN2Q9P270 581 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 PLA2G4BP0C869 781 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 IMPDH2P12268 514 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 FBLN1P23142 703 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 ILF2Q12905 390 aaKnown RBP10.21□□□□□ -0.78
COL12A1-201ENST00000322507 CSTF3Q12996 717 aaKnown RBP10.21□□□□□ -0.78
COL12A1-201ENST00000322507 DNAL1Q4LDG9 190 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 LRRC31Q6UY01 552 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 TMEM179Q6ZVK1 233 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 MIGA2Q7L4E1 593 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 RAB42Q8N4Z0 105 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 TRIM54Q9BYV2 358 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 USP6P35125 1406 aa10.21□□□□□ -0.78
COL12A1-201ENST00000322507 CYP2C19P33261 490 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 SLC1A1P43005 524 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 C1orf228Q6PIY5 440 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 ZNF574Q6ZN55 896 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-201ENST00000322507 STAG2Q8N3U4 1231 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 VMP1Q96GC9 406 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 RBBP8Q99708 897 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 K7ERI5 159 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 MFAP3LO75121 409 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 TRIM67Q6ZTA4 783 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 EPC1Q9H2F5 836 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 FRMPD2Q68DX3 1309 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-201ENST00000322507 SNX2O60749 519 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 TOM1L1O75674 476 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 MYO1DO94832 1006 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 ATF4P18848 351 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-201ENST00000322507 PSMA2P25787 234 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 IREB2P48200 963 aaKnown RBP10.2□□□□□ -0.78
COL12A1-201ENST00000322507 TMEM35BQ8NCS4 154 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 FAM149B1Q96BN6 582 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 GMNCA6NCL1 334 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 LGALS16A8MUM7 142 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 APOL3O95236 402 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 KRT24Q2M2I5 525 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 TCHHL1Q5QJ38 904 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-201ENST00000322507 PRUNE1Q86TP1 453 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
COL12A1-201ENST00000322507 C1orf50Q9BV19 199 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 CALN1Q9BXU9 219 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 SUGT1Q9Y2Z0 365 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 JAK1P23458 1154 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 RAB2AP61019 212 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 ZCWPW2Q504Y3 356 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 TRIQKQ629K1 86 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 KCTD16Q68DU8 428 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 FTOQ9C0B1 505 aaKnown RBP eCLIP10.2□□□□□ -0.78
COL12A1-201ENST00000322507 ACAD9Q9H845 621 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 EFR3BQ9Y2G0 817 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 GLI2P10070 1586 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 F8W810 466 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 PPEF1O14829 653 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-201ENST00000322507 ALOX5P09917 674 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 SAT1P21673 171 aa10.2□□□□□ -0.78
COL12A1-201ENST00000322507 VHLP40337 213 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms