RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 UBE4BO95155 1302 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 DNAH12Q6ZR08 3092 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 MUTP22033 750 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 IFNAR2P48551 515 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 ZNF280AP59817 542 aaPredicted RBP16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 SP2Q02086 613 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 ERICH1Q86X53 443 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 ANKRD35Q8N283 1001 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 KCTD17Q8N5Z5 321 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 ANKS4BQ8N8V4 417 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 NSUN6Q8TEA1 469 aaKnown RBP16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 ATP8B4Q8TF62 1192 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 CENPTQ96BT3 561 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 ZBTB10Q96DT7 871 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 ZNF214Q9UL59 606 aaPredicted RBP16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 ALG6Q9Y672 507 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 PFASO15067 1338 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 ASAP2O43150 1006 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 RARAP10276 462 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 ACTR2P61160 394 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 DAB2IPQ5VWQ8 1189 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 DCAF15Q66K64 600 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 CAPRIN2Q6IMN6 1127 aaKnown RBP16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 SLC9A9Q8IVB4 645 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 SYCE1Q8N0S2 351 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 UHMK1Q8TAS1 419 aaKnown RBP16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 CNOT10Q9H9A5 744 aaKnown RBP16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 ERVK-5Q9HDB9 667 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 BATF3Q9NR55 127 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 CD2APQ9Y5K6 639 aa16.62■□□□□ 0.25
SHROOM1-201ENST00000319854 LRRIQ4A6NIV6 560 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 GSTA1P08263 222 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 TMEM253P0C7T8 217 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 NQO1P15559 274 aaKnown RBP16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 NCALDP61601 193 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 SPOPLQ6IQ16 392 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 SLC39A4Q6P5W5 647 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 CEP120Q8N960 986 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 ZBTB45Q96K62 511 aaPredicted RBP16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 TXLNGYQ9BZA5 131 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 POLR3FQ9H1D9 316 aaPredicted RBP16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 SLC5A4Q9NY91 659 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 VIMP08670 466 aaKnown RBP16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 TNNI1P19237 187 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 NLGN2Q8NFZ4 835 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 RNF25Q96BH1 459 aaPredicted RBP16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 FAM167BQ9BTA0 163 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 CEP350Q5VT06 3117 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 ABL2P42684 1182 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 MMP13P45452 471 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 OTUD6AQ7L8S5 288 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 NIPA1Q7RTP0 329 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 AZI2Q9H6S1 392 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 NOP53Q9NZM5 478 aaKnown RBP16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 SUCLA2Q9P2R7 463 aaPredicted RBP16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 SLC9A2Q9UBY0 812 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 NENFQ9UMX5 172 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 TRIM33Q9UPN9 1127 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 PTPN22Q9Y2R2 807 aa16.61■□□□□ 0.25
SHROOM1-201ENST00000319854 ANKRD62A6NC57 917 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 IGF2BP3O00425 579 aaKnown RBP eCLIP16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 CES2O00748 559 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 KRT16P08779 473 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 ALADP13716 330 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 SFNP31947 248 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 POLGP54098 1239 aaPredicted RBP16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 TGFB2P61812 414 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 POU5F1Q01860 360 aaKnown RBP16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 ITIH4Q14624 930 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 NFIL3Q16649 462 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 WDR78Q5VTH9 848 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 SV2AQ7L0J3 742 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 EPS8L1Q8TE68 723 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 SEC14L1Q92503 715 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 CYP39A1Q9NYL5 469 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 SPOPO43791 374 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 PPFIA2O75334 1257 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 KCNA2P16389 499 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 MARK3P27448 753 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 THEMIS2Q5TEJ8 643 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 PASD1Q8IV76 773 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 ATP6V0A1Q93050 837 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 HES6Q96HZ4 224 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 CALR3Q96L12 384 aaKnown RBP16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 YIPF3Q9GZM5 350 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 R3HDMLQ9H3Y0 253 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 AS3MTQ9HBK9 375 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 STXBP5LQ9Y2K9 1186 aa16.6■□□□□ 0.25
SHROOM1-201ENST00000319854 BTNL10A8MVZ5 291 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 DSG3P32926 999 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 KIF22Q14807 665 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 KRT39Q6A163 491 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 SPDYE1Q8NFV5 336 aaPredicted RBP16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 ZNF653Q96CK0 615 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 SYT11Q9BT88 431 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 TEX13BQ9BXU2 312 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 TRIM7Q9C029 511 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 ECT2Q9H8V3 914 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 XPNPEP1Q9NQW7 623 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms