RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 RGS7P49802 495 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 PPP3CAQ08209 521 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 MKRN4PQ13434 485 aaPredicted RBP9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 RUFY4Q6ZNE9 571 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 KAT5Q92993 513 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 KLHL11Q9NVR0 708 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 SEPT10Q9P0V9 454 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 TXNDC16Q9P2K2 825 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 LTBP3Q9NS15 1303 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 AKAP11Q9UKA4 1901 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 CALB1P05937 261 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 SLC26A2P50443 739 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 RBP5P82980 135 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 ACVR2BQ13705 512 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 CASP8Q14790 479 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 PLCB4Q15147 1175 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 CELF3Q5SZQ8 465 aaKnown RBP9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 TMEM161BQ8NDZ6 487 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 FAM49BQ9NUQ9 324 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 NOC2LQ9Y3T9 749 aaKnown RBP9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 ZNF536O15090 1300 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 RRN3P2A6NIE6 340 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 OPLAHO14841 1288 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 ADCY3O60266 1144 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 MMEP08473 750 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 CXCL8P10145 99 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 GLRA2P23416 452 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 GTF2H1P32780 548 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 CPT1AP50416 773 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 EPHB4P54760 987 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 FCGRTP55899 365 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 BEX3Q00994 111 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 DHX9Q08211 1270 aaKnown RBP9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 MTMR3Q13615 1198 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 FAM102AQ5T9C2 384 aaPredicted RBP9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 PPP1R2P3Q6NXS1 205 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 MAP4K3Q8IVH8 894 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 PPP1R14CQ8TAE6 165 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 PARD3BQ8TEW8 1205 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 KATNAL1Q9BW62 490 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 NIF3L1Q9GZT8 377 aa9.91□□□□□ -0.82
TMEM39A-201ENST00000319172 MANSC4A6NHS7 340 aaPredicted RBP9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 BUB1BO60566 1050 aaPredicted RBP9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 RPS6KA5O75582 802 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 LGALS2P05162 132 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 CLTAP09496 248 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 VSNL1P62760 191 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 KCNMA1Q12791 1236 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 MPZL3Q6UWV2 235 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 SLC47A2Q86VL8 602 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 ARHGEF19Q8IW93 802 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 RNPC3Q96LT9 517 aaKnown RBP9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 LRRC1Q9BTT6 524 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 VTA1Q9NP79 307 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 ACP6Q9NPH0 428 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 NMRK2Q9NPI5 230 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 RNF19AQ9NV58 838 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 PABPN1LA6NDY0 278 aaKnown RBP9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 PI4K2BG5E9Z4 385 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 STK10O94804 968 aaKnown RBP9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 ARL1P40616 181 aaPredicted RBP9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 MYL6P60660 151 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 ATP11AP98196 1134 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 CUL2Q13617 745 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 GRIK4Q16099 956 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 CYP4F22Q6NT55 531 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 CPLX4Q7Z7G2 160 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 CCDC63Q8NA47 563 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 TINF2Q9BSI4 451 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 WRAP73Q9P2S5 460 aaPredicted RBP9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 AMACRQ9UHK6 382 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 FAM169AQ9Y6X4 670 aa9.9□□□□□ -0.82
TMEM39A-201ENST00000319172 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.9□□□□□ -0.83
TMEM39A-201ENST00000319172 ZNF862O60290 1169 aa9.9□□□□□ -0.83
TMEM39A-201ENST00000319172 PPFIA4O75335 1185 aa9.9□□□□□ -0.83
TMEM39A-201ENST00000319172 MAPTP10636 758 aaKnown RBP9.9□□□□□ -0.83
TMEM39A-201ENST00000319172 KCNA2P16389 499 aa9.9□□□□□ -0.83
TMEM39A-201ENST00000319172 AMHR2Q16671 573 aa9.9□□□□□ -0.83
TMEM39A-201ENST00000319172 CC2D1AQ6P1N0 951 aaPredicted RBP9.9□□□□□ -0.83
TMEM39A-201ENST00000319172 GPR142Q7Z601 462 aa9.9□□□□□ -0.83
TMEM39A-201ENST00000319172 CTAGE3PQ8IX95 158 aa9.9□□□□□ -0.83
TMEM39A-201ENST00000319172 LRRC15Q8TF66 581 aa9.9□□□□□ -0.83
TMEM39A-201ENST00000319172 HPDLQ96IR7 371 aa9.9□□□□□ -0.83
TMEM39A-201ENST00000319172 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.9□□□□□ -0.834e-8■■■■□ 20.8
TMEM39A-201ENST00000319172 PPANQ9NQ55 473 aaKnown RBP9.9□□□□□ -0.83
TMEM39A-201ENST00000319172 CCDC188H7C350 402 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 ADRB2P07550 413 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 STAG3L1P0CL83 205 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 HSPA6P17066 643 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 KRT15P19012 456 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 MYBPC2Q14324 1141 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 GPAT2Q6NUI2 795 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 TRIM72Q6ZMU5 477 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 TRAPPC11Q7Z392 1133 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 TLK2Q86UE8 772 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 TMC2Q8TDI7 906 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 BTBD6Q96KE9 485 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 OSGEPQ9NPF4 335 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 ALG6Q9Y672 507 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 SYNGAP1Q96PV0 1343 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms