RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 BCRP11274 1271 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 ITGB4P16144 1822 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 ALDH3A1P30838 453 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 ZNF76P36508 570 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 SKIV2L2P42285 1042 aaKnown RBP10.28□□□□□ -0.76
PTPRA-202ENST00000318266 SCN7AQ01118 1682 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 ROR2Q01974 943 aaKnown RBP10.28□□□□□ -0.76
PTPRA-202ENST00000318266 CLUL1Q15846 466 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 RINT1Q6NUQ1 792 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 ZNF804AQ7Z570 1209 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 CCNJLQ8IV13 435 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 DOT1LQ8TEK3 1739 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 WNT8AQ9H1J5 351 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 ZFP69BQ9UJL9 534 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 FRMPD4Q14CM0 1322 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 UBTFL6P0CB48 400 aaPredicted RBP10.28□□□□□ -0.76
PTPRA-202ENST00000318266 RPA3P35244 121 aaPredicted RBP10.28□□□□□ -0.76
PTPRA-202ENST00000318266 SSR1P43307 286 aaKnown RBP10.28□□□□□ -0.76
PTPRA-202ENST00000318266 PPP4CP60510 307 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 CDR2Q01850 454 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 PKN2Q16513 984 aaKnown RBP10.28□□□□□ -0.76
PTPRA-202ENST00000318266 PARP6Q2NL67 630 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 ODR4Q5SWX8 454 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 SNX30Q5VWJ9 437 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 NOP9Q86U38 636 aaKnown RBP10.28□□□□□ -0.76
PTPRA-202ENST00000318266 FAM178BQ8IXR5 827 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.28□□□□□ -0.763e-6■■■■■ 69.6
PTPRA-202ENST00000318266 SLFN12Q8IYM2 578 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 EIF2AK1Q9BQI3 630 aaKnown RBP10.28□□□□□ -0.76
PTPRA-202ENST00000318266 MOV10L1Q9BXT6 1211 aaKnown RBP10.28□□□□□ -0.76
PTPRA-202ENST00000318266 AGPAT3Q9NRZ7 376 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 NUMBLQ9Y6R0 609 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 CFAP69A5D8W1 941 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 SMAPO00193 183 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 ATP9AO75110 1047 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 KCNA3P22001 575 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 UBXN2AP68543 259 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 LAMB3Q13751 1172 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 KIF22Q14807 665 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 MFSD14BQ5SR56 506 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 GSTA5Q7RTV2 222 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 SCYL3Q8IZE3 742 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 ANKRD35Q8N283 1001 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 ZSWIM2Q8NEG5 633 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 ETNPPLQ8TBG4 499 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 MIPEPQ99797 713 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 WHRNQ9P202 907 aa10.28□□□□□ -0.76
PTPRA-202ENST00000318266 G3BP2Q9UN86 482 aaKnown RBP10.28□□□□□ -0.76
PTPRA-202ENST00000318266 A0A0G2JND7 137 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 ANKRD33BA6NCL7 494 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 CAPN9O14815 690 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 GAS8O95995 478 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 PYGLP06737 847 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 ZCCHC18P0CG32 403 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 ITIH2P19823 946 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 YARSP54577 528 aaKnown RBP10.27□□□□□ -0.77
PTPRA-202ENST00000318266 BFSP1Q12934 665 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 KPNB1Q14974 876 aaKnown RBP10.27□□□□□ -0.77
PTPRA-202ENST00000318266 SLC1A5Q15758 541 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 CYP1B1Q16678 543 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 ZNF568Q3ZCX4 644 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 RHBDF2Q6PJF5 856 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 MFN1Q8IWA4 741 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 GALNT15Q8N3T1 639 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 RBBP8NLQ8NC74 664 aaPredicted RBP10.27□□□□□ -0.77
PTPRA-202ENST00000318266 SCG3Q8WXD2 468 aaKnown RBP10.27□□□□□ -0.77
PTPRA-202ENST00000318266 CCDC77Q9BR77 488 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 SH2D3AQ9BRG2 576 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 VCXQ9H320 206 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 TRABDQ9H4I3 376 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 SCOCQ9UIL1 159 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 ANAPC7Q9UJX3 599 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 ATF5Q9Y2D1 282 aaPredicted RBP10.27□□□□□ -0.77
PTPRA-202ENST00000318266 GOLGA8RI6L899 631 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 RTN3O95197 1032 aaPredicted RBP10.27□□□□□ -0.77
PTPRA-202ENST00000318266 GGPS1O95749 300 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 FGFR1P11362 822 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 IVDP26440 423 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 MARK3P27448 753 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 SERPINB4P48594 390 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 PPP3CAQ08209 521 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 ACVR2BQ13705 512 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 FASTKD3Q14CZ7 662 aaKnown RBP10.27□□□□□ -0.77
PTPRA-202ENST00000318266 CERKLQ49MI3 558 aaPredicted RBP10.27□□□□□ -0.77
PTPRA-202ENST00000318266 ZFYVE27Q5T4F4 411 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 HHATQ5VTY9 493 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 FOXB2Q5VYV0 432 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 IZUMO3Q5VZ72 239 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 SAMD1Q6SPF0 538 aaPredicted RBP10.27□□□□□ -0.77
PTPRA-202ENST00000318266 ZNF365Q70YC5 407 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 NLRP9Q7RTR0 991 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 TAB3Q8N5C8 712 aaPredicted RBP10.27□□□□□ -0.77
PTPRA-202ENST00000318266 ZNF526Q8TF50 670 aaPredicted RBP10.27□□□□□ -0.77
PTPRA-202ENST00000318266 C7orf43Q8WVR3 580 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 NRG4Q8WWG1 115 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 CD101Q93033 1021 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 GRAMD1AQ96CP6 724 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 RBM15Q96T37 977 aaKnown RBP eCLIP10.27□□□□□ -0.77
PTPRA-202ENST00000318266 SETDB2Q96T68 719 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 KLF6Q99612 283 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms