RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 SCG3Q8WXD2 468 aaKnown RBP7.98□□□□□ -1.13
CDHR3-201ENST00000317716 SLC5A5Q92911 643 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 PPWD1Q96BP3 646 aaKnown RBP7.98□□□□□ -1.13
CDHR3-201ENST00000317716 NSUN4Q96CB9 384 aaKnown RBP7.98□□□□□ -1.13
CDHR3-201ENST00000317716 CRAMP1Q96RY5 1269 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 TMEM117Q9H0C3 514 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 C12orf65Q9H3J6 166 aaKnown RBP7.98□□□□□ -1.13
CDHR3-201ENST00000317716 NAALADL1Q9UQQ1 740 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 TTLL3Q9Y4R7 772 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 SPECC1L-ADORA2AF8WAN1 911 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 GSTA1P08263 222 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 CASP5P51878 434 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 PSMC6P62333 389 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 KPNB1Q14974 876 aaKnown RBP7.98□□□□□ -1.13
CDHR3-201ENST00000317716 CIAPIN1Q6FI81 312 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 RTKN2Q8IZC4 609 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 ZNF483Q8TF39 744 aaPredicted RBP7.98□□□□□ -1.13
CDHR3-201ENST00000317716 SCFD1Q8WVM8 642 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 RXFP1Q9HBX9 757 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 C1orf112Q9NSG2 853 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 BLOC1S4Q9NUP1 217 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 ADAM22Q9P0K1 906 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 ANKFY1Q9P2R3 1169 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 PACSIN3Q9UKS6 424 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 TRAF3IP3Q9Y228 551 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 PCDHB4Q9Y5E5 795 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 ASAP2O43150 1006 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 MAP3K6O95382 1288 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 PYGMP11217 842 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 DESP17661 470 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 KRT4P19013 534 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 CDK17Q00537 523 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 AUHQ13825 339 aaKnown RBP7.98□□□□□ -1.13
CDHR3-201ENST00000317716 TMEM259Q4ZIN3 620 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 XKR9Q5GH70 373 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 SLC10A5Q5PT55 438 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 SCARA5Q6ZMJ2 495 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 ARHGAP22Q7Z5H3 698 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 USP37Q86T82 979 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 NT5DC3Q86UY8 548 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 EXOC3L1Q86VI1 746 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 FBXO11Q86XK2 927 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 RHPN2Q8IUC4 686 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 EGFL6Q8IUX8 553 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 ATP8B4Q8TF62 1192 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 FAM84AQ96KN4 292 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 ZNF570Q96NI8 536 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 PNMA5Q96PV4 448 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 PI4K2AQ9BTU6 479 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 RUSC1Q9BVN2 902 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 TBC1D10AQ9BXI6 508 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 SH3GLB2Q9NR46 395 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 PCSK1NQ9UHG2 260 aa7.98□□□□□ -1.13
CDHR3-201ENST00000317716 CASQ2O14958 399 aaPredicted RBP7.97□□□□□ -1.13
CDHR3-201ENST00000317716 CYTH3O43739 400 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 LPXNO60711 386 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 ATP5HO75947 161 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 TTLL1O95922 423 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 KRT10P13645 584 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 SOX11P35716 441 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 PEX3P56589 373 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 DYNC1I2Q13409 638 aaKnown RBP7.97□□□□□ -1.13
CDHR3-201ENST00000317716 PDCD2Q16342 344 aaPredicted RBP7.97□□□□□ -1.13
CDHR3-201ENST00000317716 MMEL1Q495T6 779 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 RINT1Q6NUQ1 792 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 MIER3Q7Z3K6 550 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 LCA5Q86VQ0 697 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 EFCAB3Q8N7B9 438 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 TRIML2Q8N7C3 387 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 PAF1Q8N7H5 531 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 STK32AQ8WU08 396 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 UCMAQ8WVF2 138 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 MTBPQ96DY7 904 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 RNPEPL1Q9HAU8 725 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 PIDD1Q9HB75 910 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 PICK1Q9NRD5 415 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 SLC12A6Q9UHW9 1150 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 PCDHGC5Q9Y5F6 944 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 FLT1P17948 1338 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 C2orf71A6NGG8 1288 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 HNRNPDLO14979 420 aaKnown RBP7.97□□□□□ -1.13
CDHR3-201ENST00000317716 BMP3P12645 472 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 CALB2P22676 271 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 MAGEA4P43358 317 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 FMO5P49326 533 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 RCAN1P53805 252 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 MFAP3P55082 362 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 IYDQ6PHW0 289 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 CENPUQ71F23 418 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 SLC13A5Q86YT5 568 aaPredicted RBP7.97□□□□□ -1.13
CDHR3-201ENST00000317716 CCNJLQ8IV13 435 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 CD302Q8IX05 232 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 SLFN12Q8IYM2 578 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 ADGRF4Q8IZF3 695 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 ZNF513Q8N8E2 541 aaPredicted RBP7.97□□□□□ -1.13
CDHR3-201ENST00000317716 ALG3Q92685 438 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 ATXN7L3BQ96GX2 97 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 FAXDC2Q96IV6 333 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 ACAP3Q96P50 834 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 TRAIPQ9BWF2 469 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms