RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ALDH1B1P30837 517 aa20.37■□□□□ 0.85
RTN4-201ENST00000317610 MKRN4PQ13434 485 aaPredicted RBP20.37■□□□□ 0.85
RTN4-201ENST00000317610 SNRNP35Q16560 246 aaKnown RBP20.37■□□□□ 0.85
RTN4-201ENST00000317610 CBWD2Q8IUF1 395 aa20.37■□□□□ 0.85
RTN4-201ENST00000317610 RMDN2Q96LZ7 410 aa20.37■□□□□ 0.85
RTN4-201ENST00000317610 NT5C1BQ96P26 610 aa20.37■□□□□ 0.85
RTN4-201ENST00000317610 MLXIPLQ9NP71 852 aa20.37■□□□□ 0.85
RTN4-201ENST00000317610 ANAPC7Q9UJX3 599 aa20.37■□□□□ 0.85
RTN4-201ENST00000317610 RGPD3A6NKT7 1758 aaPredicted RBP20.37■□□□□ 0.85
RTN4-201ENST00000317610 RGPD4Q7Z3J3 1758 aa20.37■□□□□ 0.85
RTN4-201ENST00000317610 FOXO6A8MYZ6 492 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 DDX39AO00148 427 aaKnown RBP20.36■□□□□ 0.85
RTN4-201ENST00000317610 DHX15O43143 795 aaKnown RBP20.36■□□□□ 0.85
RTN4-201ENST00000317610 STX2P32856 288 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 MGAT5Q09328 741 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 PTP4A2Q12974 167 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 AEBP2Q6ZN18 517 aaPredicted RBP20.36■□□□□ 0.85
RTN4-201ENST00000317610 GDAP1Q8TB36 358 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 PARD3BQ8TEW8 1205 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 DDX27Q96GQ7 796 aaKnown RBP20.36■□□□□ 0.85
RTN4-201ENST00000317610 FAM81BQ96LP2 452 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 MOV10L1Q9BXT6 1211 aaKnown RBP20.36■□□□□ 0.85
RTN4-201ENST00000317610 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.36■□□□□ 0.858e-8■■■■■ 43.4
RTN4-201ENST00000317610 NAALADL1Q9UQQ1 740 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 COL11A2P13942 1736 aaPredicted RBP20.36■□□□□ 0.85
RTN4-201ENST00000317610 MROH7Q68CQ1 1323 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 GOLGA8IPA6NC78 632 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 GOLGA8JA6NMD2 632 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 PLA2G6O60733 806 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 UNGP13051 313 aaPredicted RBP20.36■□□□□ 0.85
RTN4-201ENST00000317610 ADSSP30520 456 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 MSH2P43246 934 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 STRN3Q13033 797 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 LLGL1Q15334 1064 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 PPP1R21Q6ZMI0 780 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 NIPA1Q7RTP0 329 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 ANKLE1Q8NAG6 615 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 BBOF1Q8ND07 529 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 SLC17A8Q8NDX2 589 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 ACER1Q8TDN7 264 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 CHURC1Q8WUH1 139 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 BATF3Q9NR55 127 aa20.36■□□□□ 0.85
RTN4-201ENST00000317610 TAC1P20366 129 aa20.35■□□□□ 0.85
RTN4-201ENST00000317610 KLF1Q13351 362 aaPredicted RBP20.35■□□□□ 0.85
RTN4-201ENST00000317610 STAT4Q14765 748 aa20.35■□□□□ 0.85
RTN4-201ENST00000317610 KIF2BQ8N4N8 673 aa20.35■□□□□ 0.85
RTN4-201ENST00000317610 NKIRAS1Q9NYS0 192 aa20.35■□□□□ 0.85
RTN4-201ENST00000317610 KLHL14Q9P2G3 628 aa20.35■□□□□ 0.85
RTN4-201ENST00000317610 GTF2H1P32780 548 aa20.35■□□□□ 0.85
RTN4-201ENST00000317610 ADCY8P40145 1251 aa20.35■□□□□ 0.85
RTN4-201ENST00000317610 TRIP13Q15645 432 aaPredicted RBP20.35■□□□□ 0.85
RTN4-201ENST00000317610 TMEM63BQ5T3F8 832 aa20.35■□□□□ 0.85
RTN4-201ENST00000317610 RIBC1Q8N443 379 aaPredicted RBP20.35■□□□□ 0.85
RTN4-201ENST00000317610 FBXL13Q8NEE6 735 aa20.35■□□□□ 0.85
RTN4-201ENST00000317610 TMC2Q8TDI7 906 aa20.35■□□□□ 0.85
RTN4-201ENST00000317610 TRIM7Q9C029 511 aa20.35■□□□□ 0.85
RTN4-201ENST00000317610 KCNH7Q9NS40 1196 aa20.35■□□□□ 0.85
RTN4-201ENST00000317610 DNAJC17Q9NVM6 304 aaKnown RBP20.35■□□□□ 0.85
RTN4-201ENST00000317610 R3HDM2Q9Y2K5 976 aaKnown RBP20.35■□□□□ 0.85
RTN4-201ENST00000317610 SLC16A4O15374 487 aa20.34■□□□□ 0.85
RTN4-201ENST00000317610 WFS1O76024 890 aa20.34■□□□□ 0.85
RTN4-201ENST00000317610 ABHD2P08910 425 aa20.34■□□□□ 0.85
RTN4-201ENST00000317610 MYBL1P10243 752 aa20.34■□□□□ 0.85
RTN4-201ENST00000317610 QARSP47897 775 aaKnown RBP20.34■□□□□ 0.85
RTN4-201ENST00000317610 HSD17B4P51659 736 aa20.34■□□□□ 0.85
RTN4-201ENST00000317610 ZKSCAN8Q15776 578 aaPredicted RBP20.34■□□□□ 0.85
RTN4-201ENST00000317610 ECHDC2Q86YB7 292 aa20.34■□□□□ 0.85
RTN4-201ENST00000317610 MCOLN2Q8IZK6 566 aa20.34■□□□□ 0.85
RTN4-201ENST00000317610 TAS1R2Q8TE23 839 aa20.34■□□□□ 0.85
RTN4-201ENST00000317610 DHX38Q92620 1227 aaKnown RBP20.34■□□□□ 0.85
RTN4-201ENST00000317610 PRCCQ92733 491 aaPredicted RBP20.34■□□□□ 0.85
RTN4-201ENST00000317610 TDRD3Q9H7E2 651 aaKnown RBP20.34■□□□□ 0.85
RTN4-201ENST00000317610 RAB20Q9NX57 234 aa20.34■□□□□ 0.85
RTN4-201ENST00000317610 HERC5Q9UII4 1024 aaKnown RBP20.34■□□□□ 0.85
RTN4-201ENST00000317610 EXOC7Q9UPT5 735 aa20.34■□□□□ 0.85
RTN4-201ENST00000317610 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.34■□□□□ 0.85
RTN4-201ENST00000317610 PSEN1P49768 467 aa20.33■□□□□ 0.85
RTN4-201ENST00000317610 CCNG2Q16589 344 aa20.33■□□□□ 0.85
RTN4-201ENST00000317610 GRIPAP1Q4V328 841 aa20.33■□□□□ 0.85
RTN4-201ENST00000317610 THOC1Q96FV9 657 aaKnown RBP20.33■□□□□ 0.85
RTN4-201ENST00000317610 MFSD14AQ96MC6 490 aa20.33■□□□□ 0.85
RTN4-201ENST00000317610 CSRNP1Q96S65 589 aa20.33■□□□□ 0.85
RTN4-201ENST00000317610 A8MUI8 341 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 MAGEB2O15479 319 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 UNC5CO95185 931 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 FOXN2P32314 431 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 CCNG1P51959 295 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 PEX3P56589 373 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 TNIP1Q15025 636 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 SLC27A3Q5K4L6 730 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 ENOSF1Q7L5Y1 443 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 LDHDQ86WU2 507 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 SRRM1Q8IYB3 904 aaKnown RBP20.33■□□□□ 0.84
RTN4-201ENST00000317610 MAML1Q92585 1016 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 CCDC127Q96BQ5 260 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 TRIM11Q96F44 468 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 FBXL18Q96ME1 805 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 PWWP2AQ96N64 755 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 CCDC77Q9BR77 488 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 FOXP3Q9BZS1 431 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms