RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ZNF707Q96C28 371 aaPredicted RBP15.96■□□□□ 0.15
PPP1CA-201ENST00000312989 CHAMP1Q96JM3 812 aa15.96■□□□□ 0.15
PPP1CA-201ENST00000312989 ACAP3Q96P50 834 aa15.96■□□□□ 0.15
PPP1CA-201ENST00000312989 PANK2Q9BZ23 570 aa15.96■□□□□ 0.15
PPP1CA-201ENST00000312989 TOPORSQ9NS56 1045 aaPredicted RBP15.96■□□□□ 0.15
PPP1CA-201ENST00000312989 CCDC39Q9UFE4 941 aa15.96■□□□□ 0.15
PPP1CA-201ENST00000312989 TUBGCP4Q9UGJ1 667 aa15.96■□□□□ 0.15
PPP1CA-201ENST00000312989 MUTYHQ9UIF7 546 aa15.96■□□□□ 0.15
PPP1CA-201ENST00000312989 SSX2IPQ9Y2D8 614 aa15.96■□□□□ 0.15
PPP1CA-201ENST00000312989 STYXL1Q9Y6J8 313 aa15.96■□□□□ 0.15
PPP1CA-201ENST00000312989 CLDN3O15551 220 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 TGM5O43548 720 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 DCXO43602 365 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 TBCAO75347 108 aaKnown RBP15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 C1RP00736 705 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 BRCC3P46736 316 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 CASP5P51878 434 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 STK38Q15208 465 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 ENOX2Q16206 610 aaKnown RBP15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 FAM171A1Q5VUB5 890 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 DCLRE1AQ6PJP8 1040 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 TMC5Q6UXY8 1006 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 CCDC73Q6ZRK6 1079 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 APBB1IPQ7Z5R6 666 aaPredicted RBP15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 SPRYD3Q8NCJ5 442 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 CMASQ8NFW8 434 aaPredicted RBP15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 RPGRIP1Q96KN7 1286 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 UROC1Q96N76 676 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 TCHPQ9BT92 498 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 LRFN3Q9BTN0 628 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 TTPALQ9BTX7 342 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 C1QTNF1Q9BXJ1 281 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 RHOBTB2Q9BYZ6 727 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 SFXN1Q9H9B4 322 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 MAN1C1Q9NR34 630 aa15.95■□□□□ 0.14
PPP1CA-201ENST00000312989 MYH15Q9Y2K3 1946 aa15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 FAM86C2PA6NEL3 165 aa15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 I3L4J1 428 aa15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 PODXLO00592 558 aa15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 HNRNPDLO14979 420 aaKnown RBP15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 GPR37L1O60883 481 aa15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 B3GAT3O94766 335 aa15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 ADH1AP07327 375 aa15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 ADSSP30520 456 aa15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 YARSP54577 528 aaKnown RBP15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 PDILTQ8N807 584 aa15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 DDX27Q96GQ7 796 aaKnown RBP15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 ZNF396Q96N95 335 aaPredicted RBP15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 OLFML3Q9NRN5 406 aa15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 KBTBD4Q9NVX7 518 aa15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 CPSF3Q9UKF6 684 aaKnown RBP15.94■□□□□ 0.14
PPP1CA-201ENST00000312989 PLXNA3P51805 1871 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 VWA8A3KMH1 1905 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 C2CD4DB7Z1M9 353 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 TBC1D4O60343 1298 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 CUTAO60888 179 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 RFPL2O75678 378 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 GLUD1P00367 558 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 KRT18P05783 430 aaKnown RBP15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 CLTAP09496 248 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 PDIA4P13667 645 aaKnown RBP15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 TKTP29401 623 aaKnown RBP15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 TXLNAP40222 546 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 STAT6P42226 847 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 LIG4P49917 911 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 DNM1Q05193 864 aaKnown RBP15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 SPAG1Q07617 926 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 FOXD4L6Q3SYB3 417 aaPredicted RBP15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 FOXD4L3Q6VB84 417 aaPredicted RBP15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 C15orf39Q6ZRI6 1047 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 SV2BQ7L1I2 683 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 GLIS3Q8NEA6 775 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 NECTIN4Q96NY8 510 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 ZHX3Q9H4I2 956 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 SLC38A7Q9NVC3 462 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 MTRRQ9UBK8 725 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 SEL1LQ9UBV2 794 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 FBXW11Q9UKB1 542 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 PCDHA7Q9UN72 937 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 DENND4AQ7Z401 1863 aa15.93■□□□□ 0.14
PPP1CA-201ENST00000312989 OGTO15294 1046 aa15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 N4BP1O75113 896 aaKnown RBP15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 SPATA31D3P0C874 917 aa15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 MYBP10242 640 aa15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 LRPAP1P30533 357 aa15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 MTHFRP42898 656 aa15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 WNT7BP56706 349 aa15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 ELAVL2Q12926 359 aaKnown RBP15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 MRPL58Q14197 206 aaKnown RBP15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 PSMD5Q16401 504 aa15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 CRELD2Q6UXH1 353 aaPredicted RBP15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 SPATA31D4Q6ZUB0 917 aa15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 PALB2Q86YC2 1186 aa15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 HDAC7Q8WUI4 952 aa15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 STAMQ92783 540 aa15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 HVCN1Q96D96 273 aa15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 PLEKHA5Q9HAU0 1116 aa15.92■□□□□ 0.14
PPP1CA-201ENST00000312989 RAPGEFL1Q9UHV5 662 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms