RNA–Protein interactions for RNA: ENST00000312349.4

FNDC9-201, Transcript of fibronectin type III domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC9, Length 2,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9-201ENST00000312349 RNF149Q8NC42 400 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 ZNF564Q8TBZ8 553 aaPredicted RBP12.34□□□□□ -0.43
FNDC9-201ENST00000312349 CD101Q93033 1021 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 VTI1AQ96AJ9 217 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 CALR3Q96L12 384 aaKnown RBP12.34□□□□□ -0.43
FNDC9-201ENST00000312349 AZI2Q9H6S1 392 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 MED4Q9NPJ6 270 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 PLXNA1Q9UIW2 1896 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 CEP350Q5VT06 3117 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 BHMG1C9JSJ3 638 aaPredicted RBP12.34□□□□□ -0.43
FNDC9-201ENST00000312349 NOP56O00567 594 aaKnown RBP12.34□□□□□ -0.43
FNDC9-201ENST00000312349 ABLIM1O14639 778 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 CSDE1O75534 798 aaKnown RBP12.34□□□□□ -0.43
FNDC9-201ENST00000312349 SLC25A27O95847 323 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 CST3P01034 146 aaPredicted RBP12.34□□□□□ -0.43
FNDC9-201ENST00000312349 UNGP13051 313 aaPredicted RBP12.34□□□□□ -0.43
FNDC9-201ENST00000312349 LMAN1P49257 510 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 HNRNPH2P55795 449 aaKnown RBP12.34□□□□□ -0.43
FNDC9-201ENST00000312349 TCEAL1Q15170 157 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 CLEC16AQ2KHT3 1053 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 USP37Q86T82 979 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 PASD1Q8IV76 773 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 KCNN1Q92952 543 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 L3MBTL3Q96JM7 780 aaPredicted RBP12.34□□□□□ -0.43
FNDC9-201ENST00000312349 ZIM3Q96PE6 472 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 ZSWIM1Q9BR11 485 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 ACBD3Q9H3P7 528 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 RNPEPQ9H4A4 650 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 MINDY3Q9H8M7 445 aa12.34□□□□□ -0.43
FNDC9-201ENST00000312349 TTC7AQ9ULT0 858 aaPredicted RBP12.34□□□□□ -0.43
FNDC9-201ENST00000312349 DAPK3O43293 454 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 LGR5O75473 907 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 KRT14P02533 472 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 IQCF3P0C7M6 154 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 TXNP10599 105 aaKnown RBP12.33□□□□□ -0.44
FNDC9-201ENST00000312349 PYGMP11217 842 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 NF2P35240 595 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 CLCN3P51790 818 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 RHPN2Q8IUC4 686 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 CEP120Q8N960 986 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 ARL8AQ96BM9 186 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 PPP1R16BQ96T49 567 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 CGRRF1Q99675 332 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 TRIM31Q9BZY9 425 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 CARD9Q9H257 536 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 TMEM134Q9H6X4 195 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 ZNF408Q9H9D4 720 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 KIAA1586Q9HCI6 787 aa12.33□□□□□ -0.44
FNDC9-201ENST00000312349 IGKV6-21A0A0C4DH24 114 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 CLDN3O15551 220 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 MTA2O94776 668 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 OSTNP61366 133 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 NOP14P78316 857 aaKnown RBP12.32□□□□□ -0.44
FNDC9-201ENST00000312349 PAK2Q13177 524 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 CUL2Q13617 745 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 TTMPQ5BVD1 217 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 CDCA2Q69YH5 1023 aaPredicted RBP12.32□□□□□ -0.44
FNDC9-201ENST00000312349 ACAD10Q6JQN1 1059 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 TMEM270Q6UE05 265 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 USP50Q70EL3 339 aaPredicted RBP12.32□□□□□ -0.44
FNDC9-201ENST00000312349 DHX37Q8IY37 1157 aaKnown RBP12.32□□□□□ -0.44
FNDC9-201ENST00000312349 TMEM192Q8IY95 271 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 ATP8B4Q8TF62 1192 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 BBXQ8WY36 941 aaPredicted RBP12.32□□□□□ -0.44
FNDC9-201ENST00000312349 C18orf8Q96DM3 657 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 FAM212AQ96EL1 285 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 CYFIP2Q96F07 1278 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 MTMR12Q9C0I1 747 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 DPH5Q9H2P9 285 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 TAF1DQ9H5J8 278 aaPredicted RBP12.32□□□□□ -0.44
FNDC9-201ENST00000312349 CNOT8Q9UFF9 292 aaKnown RBP12.32□□□□□ -0.44
FNDC9-201ENST00000312349 GTF3C4Q9UKN8 822 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 MROH7Q68CQ1 1323 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 PLXNB2O15031 1838 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 O00370 1275 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 ZC3H11AO75152 810 aaKnown RBP eCLIP12.32□□□□□ -0.44
FNDC9-201ENST00000312349 CLSTN1O94985 981 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 GJB6O95452 261 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 RRM1P23921 792 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 HLTFQ14527 1009 aaKnown RBP eCLIP12.32□□□□□ -0.44
FNDC9-201ENST00000312349 LDLRAD1Q5T700 205 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 SLFN12LQ6IEE8 588 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 NLRP4Q96MN2 994 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 ACO2Q99798 780 aaKnown RBP12.32□□□□□ -0.44
FNDC9-201ENST00000312349 SH3GL2Q99962 352 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 TCHPQ9BT92 498 aa12.32□□□□□ -0.44
FNDC9-201ENST00000312349 CCDC188H7C350 402 aa12.31□□□□□ -0.44
FNDC9-201ENST00000312349 PRKCBP05771 671 aa12.31□□□□□ -0.44
FNDC9-201ENST00000312349 CLTAP09496 248 aa12.31□□□□□ -0.44
FNDC9-201ENST00000312349 PTENP60484 403 aa12.31□□□□□ -0.44
FNDC9-201ENST00000312349 IGBP1P78318 339 aa12.31□□□□□ -0.44
FNDC9-201ENST00000312349 ENPEPQ07075 957 aa12.31□□□□□ -0.44
FNDC9-201ENST00000312349 NCOA4Q13772 614 aa12.31□□□□□ -0.44
FNDC9-201ENST00000312349 UAP1Q16222 522 aaPredicted RBP12.31□□□□□ -0.44
FNDC9-201ENST00000312349 WDR44Q5JSH3 913 aa12.31□□□□□ -0.44
FNDC9-201ENST00000312349 EEF1DP3Q658K8 133 aa12.31□□□□□ -0.44
FNDC9-201ENST00000312349 MAP1SQ66K74 1059 aaPredicted RBP12.31□□□□□ -0.44
FNDC9-201ENST00000312349 TTC27Q6P3X3 843 aa12.31□□□□□ -0.44
FNDC9-201ENST00000312349 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.44
FNDC9-201ENST00000312349 ARMCX2Q7L311 632 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms