RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 FOCADQ5VW36 1801 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 BTNL10A8MVZ5 291 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 KBTBD13C9JR72 458 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 CES2O00748 559 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 PSMD7P51665 324 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 GPC5P78333 572 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 PAK2Q13177 524 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 MEA1Q16626 185 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 SLC35G1Q2M3R5 365 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 EFCAB12Q6NXP0 572 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 DCUN1D2Q6PH85 259 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 EPM2AIP1Q7L775 607 aaPredicted RBP6.4□□□□□ -1.38
SEC22A-201ENST00000309934 USP38Q8NB14 1042 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 FAM76AQ8TAV0 307 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 RAET1EQ8TD07 263 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 NLRP4Q96MN2 994 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 FAM213AQ9BRX8 229 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 NFKBIZQ9BYH8 718 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 SNX25Q9H3E2 840 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 RAB20Q9NX57 234 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 PYCARDQ9ULZ3 195 aa6.4□□□□□ -1.38
SEC22A-201ENST00000309934 MACROD2A1Z1Q3 448 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 EML1O00423 815 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 GPR182O15218 404 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 E2F6O75461 281 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 TOMM70O94826 608 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 FARP2O94887 1054 aaPredicted RBP6.4□□□□□ -1.39
SEC22A-201ENST00000309934 ATG7O95352 703 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 LSM8O95777 96 aaKnown RBP6.4□□□□□ -1.39
SEC22A-201ENST00000309934 GAS8O95995 478 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 PIGRP01833 764 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 KRT19P08727 400 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 SRGAP2CP0DJJ0 459 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 EDNRBP24530 442 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 IGBP1P78318 339 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 SPIRE1Q08AE8 756 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 CRYMQ14894 314 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 NAB2Q15742 525 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 ZNF699Q32M78 642 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 GKAP1Q5VSY0 366 aaPredicted RBP6.4□□□□□ -1.39
SEC22A-201ENST00000309934 ZC3H3Q8IXZ2 948 aaKnown RBP6.4□□□□□ -1.39
SEC22A-201ENST00000309934 RDH13Q8NBN7 331 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 RFFLQ8WZ73 363 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 NACA2Q9H009 215 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 PCDHB2Q9Y5E7 798 aa6.4□□□□□ -1.39
SEC22A-201ENST00000309934 TMEM253P0C7T8 217 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 CASP1P29466 404 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 ATP5DP30049 168 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 PRKCIP41743 596 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 MXRA7P84157 204 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 LRMPQ12912 555 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 RRP1BQ14684 758 aaKnown RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 FAM47CQ5HY64 1035 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 C8orf74Q6P047 294 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 ELMSAN1Q6PJG2 1045 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 EEPD1Q7L9B9 569 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 HDXQ7Z353 690 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 GABPB2Q8TAK5 448 aaPredicted RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 MIEF2Q96C03 454 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 VCPIP1Q96JH7 1222 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 FAM193BQ96PV7 902 aaPredicted RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 WNT8AQ9H1J5 351 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 KCTD10Q9H3F6 313 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 PCIF1Q9H4Z3 704 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 ITGA11Q9UKX5 1188 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 UBQLN1Q9UMX0 589 aaKnown RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 TNFSF13BQ9Y275 285 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 UTP11Q9Y3A2 253 aaKnown RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 ARIH1Q9Y4X5 557 aaPredicted RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 ARFGEF1Q9Y6D6 1849 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 MYH4Q9Y623 1939 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 PSME4Q14997 1843 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 MYO1FO00160 1098 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 HSF2BPO75031 334 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 GYPCP04921 128 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 FAM163BP0C2L3 166 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 CD19P15391 556 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 ATP2A2P16615 1042 aaKnown RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 MRPS9P82933 396 aaKnown RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 CYP24A1Q07973 514 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 KCNA1Q09470 495 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 CALCOCO2Q13137 446 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 DRAP1Q14919 205 aaPredicted RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 TREML2Q5T2D2 321 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 LRRC55Q6ZSA7 311 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 KCNN1Q92952 543 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 ABTB1Q969K4 478 aaPredicted RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 TNIP3Q96KP6 325 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 AGPAT1Q99943 283 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 MAK16Q9BXY0 300 aaKnown RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 FRMD8P1Q9BZ68 369 aaPredicted RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 CCDC113Q9H0I3 377 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 DDX56Q9NY93 547 aaKnown RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 ASTN2O75129 1339 aaPredicted RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 SMIM35A0A1B0GVV1 85 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 SFI1A8K8P3 1242 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 BTBD19C9JJ37 291 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 H3BRB1 525 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 TEX33O43247 280 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms