RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 TLE2Q04725 743 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 MTF1Q14872 753 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 DCAF4L1Q3SXM0 396 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TRIM60Q495X7 471 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ZNF618Q5T7W0 954 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 PHLDB3Q6NSJ2 640 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TOGARAM2Q6ZUX3 1019 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 IRF2BP2Q7Z5L9 587 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 NECAB2Q7Z6G3 386 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 REXO1L1PQ8IX06 675 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 SPAG5Q96R06 1193 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 EIF3CQ99613 913 aaKnown RBP13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ARHGAP20Q9P2F6 1191 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 DNAJC12Q9UKB3 198 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 M0QZ92 97 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 PQBP1O60828 265 aaKnown RBP13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 LCA5LO95447 670 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CCDC175P0C221 793 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TNNI1P19237 187 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 EN2P19622 333 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 FGFR4P22455 802 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ANXA13P27216 316 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TNFSF9P41273 254 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 STAT1P42224 750 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 FAAP100Q0VG06 881 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ENOX2Q16206 610 aaKnown RBP13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TMEM132AQ24JP5 1023 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 LRRC26Q2I0M4 334 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ASTE1Q2TB18 679 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 FBXO47Q5MNV8 452 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ZNF662Q6ZS27 426 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 NYAP1Q6ZVC0 841 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 FAM228AQ86W67 206 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CAGE1Q8TC20 777 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 SEMA4DQ92854 862 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 PPP1R13BQ96KQ4 1090 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ADPGKQ9BRR6 497 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TOPORSQ9NS56 1045 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 NOC2LQ9Y3T9 749 aaKnown RBP13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 USP27XA6NNY8 438 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 HARSP12081 509 aaKnown RBP13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 FERP16591 822 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 MBTPS1Q14703 1052 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ENOSF1Q7L5Y1 443 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CATSPER4Q7RTX7 472 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CD302Q8IX05 232 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 THNSL1Q8IYQ7 743 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TAS1R2Q8TE23 839 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CCDC42Q96M95 316 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ASB7Q9H672 318 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 RPF1Q9H9Y2 349 aaKnown RBP13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 AJAP1Q9UKB5 411 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 SQORQ9Y6N5 450 aa13.85□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 KIF2AO00139 706 aaPredicted RBP13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 PITPNM1O00562 1244 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TLR3O15455 904 aaKnown RBP13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CCDC172P0C7W6 258 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 STAG3L1P0CL83 205 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 SOX5P35711 763 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 GRM5P41594 1212 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 KRT83P78385 493 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 RAPGEF1Q13905 1077 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 LPIN1Q14693 890 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 DRAP1Q14919 205 aaPredicted RBP13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ASIC2Q16515 512 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 DUOXA2Q1HG44 320 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TDRD10Q5VZ19 366 aaKnown RBP13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 NOTUMQ6P988 496 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 SLC27A1Q6PCB7 646 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 GJB7Q6PEY0 223 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 HELQQ8TDG4 1101 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 JAKMIP2Q96AA8 810 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CPB2Q96IY4 423 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 NT5C1BQ96P26 610 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 GPR88Q9GZN0 384 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 AGO3Q9H9G7 860 aaKnown RBP13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 PLEKHA5Q9HAU0 1116 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 UBE2TQ9NPD8 197 aaPredicted RBP13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TRMT1Q9NXH9 659 aaKnown RBP13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TBX21Q9UL17 535 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 PTPRJQ12913 1337 aa13.84□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 DCDC2CA8MYV0 355 aa13.83□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 F8VZ95 297 aa13.83□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 GFPT2O94808 682 aa13.83□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 HLA-DRAP01903 254 aa13.83□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 SELPP16109 830 aa13.83□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 EIF4A3P38919 411 aaKnown RBP13.83□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 GCNT1Q02742 428 aa13.83□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 BFSP2Q13515 415 aa13.83□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 GPNMBQ14956 572 aa13.83□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 SEZ6Q53EL9 994 aa13.83□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 NT5DC4Q86YG4 428 aa13.83□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 USP38Q8NB14 1042 aa13.83□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 ERVK-5Q9HDB9 667 aa13.83□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 RPS6KA5O75582 802 aa13.82□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 VNN1O95497 513 aa13.82□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 MFAP3P55082 362 aa13.82□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 KLHL30Q0D2K2 578 aa13.82□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 SLC10A6Q3KNW5 377 aa13.82□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 WDR44Q5JSH3 913 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms