RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ROBO1Q9Y6N7 1651 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 H0Y626 953 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 MAP3K13O43283 966 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 ATP1A3P13637 1013 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 ITPRIPL1Q6GPH6 555 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 PDIK1LQ8N165 341 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 TMEM199Q8N511 208 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 PANX2Q96RD6 677 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 GRAP2O75791 330 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 ARHGEF7Q14155 803 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 STILQ15468 1287 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 MAPRE1Q15691 268 aaKnown RBP11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 CTXN3Q4LDR2 81 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 TAF1BQ53T94 588 aaPredicted RBP11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 SHC4Q6S5L8 630 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 MFSD1Q9H3U5 465 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 FBXO2Q9UK22 296 aaPredicted RBP11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 TBX20Q9UMR3 447 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 MT-ND3P03897 115 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 DCAF6Q58WW2 860 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 SLC30A10Q6XR72 485 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 RAPGEF5Q92565 580 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 POMCP01189 267 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 NCAM1P13591 858 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 CLCN1P35523 988 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 BCAR1P56945 870 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 SALL1Q9NSC2 1324 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 SLC16A3O15427 465 aaKnown RBP11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 FGGP02679 453 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 GHRP10912 638 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 RPA1P27694 616 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 ADCYAP1R1P41586 468 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 PGM5Q15124 567 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 HABP4Q5JVS0 413 aaKnown RBP11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 ARHGAP18Q8N392 663 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 PPFIBP2Q8ND30 876 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 MRPS31Q92665 395 aaKnown RBP11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 DPP7Q9UHL4 492 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 CAMTA1Q9Y6Y1 1673 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 PARP4Q9UKK3 1724 aaKnown RBP11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 IRF6O14896 467 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 MSCO60682 206 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 CHEK2O96017 543 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 MBL2P11226 248 aaPredicted RBP11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 METTL7BQ6UX53 244 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 SLC30A5Q8TAD4 765 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 EMILIN2Q9BXX0 1053 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 FMN2Q9NZ56 1722 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 CASZ1Q86V15 1759 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 TAC1P20366 129 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 SHMT1P34896 483 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 APOBEC3HQ6NTF7 200 aaKnown RBP11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 OR6P1Q8NGX9 317 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 CCSER1Q9C0I3 900 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 MYMKA6NI61 221 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 CYB561D2O14569 222 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 SLC37A4O43826 429 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 ZMYND10O75800 440 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 MYL4P12829 197 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 PTPRAP18433 802 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 SERPINB6P35237 376 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 PSEN2P49810 448 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 ANTXR2P58335 489 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 DEUP1Q05D60 604 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 GJC2Q5T442 439 aaPredicted RBP11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 RASSF3Q86WH2 238 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 ATPAF2Q8N5M1 289 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 CALR3Q96L12 384 aaKnown RBP11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 GOLGA8QA0A0J9YX86 632 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 GOLGA8OA6NCC3 632 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 GOLGA8NF8WBI6 632 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 MNAT1P51948 309 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 CDH18Q13634 790 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 SMAD1Q15797 465 aaKnown RBP11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 ZFPM1Q8IX07 1006 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 TSSK1BQ9BXA7 367 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 SLC13A4Q9UKG4 626 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 SYF2O95926 243 aaKnown RBP11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 TWF1Q12792 350 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 IKBKEQ14164 716 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 SYTL5Q8TDW5 730 aaPredicted RBP11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 PI4K2AQ9BTU6 479 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 VCXQ9H320 206 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 GPRC5CQ9NQ84 441 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 SLC25A13Q9UJS0 675 aa11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 UBQLN1Q9UMX0 589 aaKnown RBP11.32□□□□□ -0.6
SYNPO2-201ENST00000307142 EXOC1LA0A1B0GW35 172 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 ACADSBP45954 432 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 SLC26A2P50443 739 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 KPNA1P52294 538 aaPredicted RBP11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 SYTL3Q4VX76 610 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 SAMD3Q8N6K7 520 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 EGFL8Q99944 293 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 C7orf25Q9BPX7 421 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 ADGRB2O60241 1585 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 FOXN1O15353 648 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 NAMPTP43490 491 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 ATP1A2P50993 1020 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 FMR1NBQ8N0W7 255 aaPredicted RBP11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 PABPC5Q96DU9 382 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms