RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 SFNP31947 248 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 FNTAP49354 379 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 CIAPIN1Q6FI81 312 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 ADPGKQ9BRR6 497 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 SLC13A1Q9BZW2 595 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 SMYD2Q9NRG4 433 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 ABCD1P33897 745 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 SLC12A2P55011 1212 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 DTX3LQ8TDB6 740 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 SERPINB12Q96P63 405 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 INPP4AQ96PE3 977 aaPredicted RBP14.08□□□□□ -0.16
DDX54-201ENST00000306014 UBN1Q9NPG3 1134 aa14.08□□□□□ -0.16
DDX54-201ENST00000306014 FSBPO95073 299 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 TRIM72Q6ZMU5 477 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 ZNF720Q7Z2F6 126 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 LONP2Q86WA8 852 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 IQCKQ8N0W5 287 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 HAS1Q92839 578 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 ZNF668Q96K58 619 aaPredicted RBP14.07□□□□□ -0.16
DDX54-201ENST00000306014 TTC1Q99614 292 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 SENP1Q9P0U3 644 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 BCAP29Q9UHQ4 241 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 SALL4Q9UJQ4 1053 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 PCDHA10Q9Y5I2 948 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 UBE4BO95155 1302 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 TBXAS1P24557 533 aaPredicted RBP14.07□□□□□ -0.16
DDX54-201ENST00000306014 TNFRSF8P28908 595 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 SREBF1P36956 1147 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 PSMC1P62191 440 aaKnown RBP14.07□□□□□ -0.16
DDX54-201ENST00000306014 NPY5RQ15761 445 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 CBWD2Q8IUF1 395 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 RPS6KC1Q96S38 1066 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 KDM4CQ9H3R0 1056 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 SMYD3Q9H7B4 428 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 GPRC5CQ9NQ84 441 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 FAM53CQ9NYF3 392 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 SMG5Q9UPR3 1016 aaKnown RBP14.07□□□□□ -0.16
DDX54-201ENST00000306014 SPECC1L-ADORA2AF8WAN1 911 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 AGPSO00116 658 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 CAPN9O14815 690 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 ITIH4Q14624 930 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 ZNF667Q5HYK9 610 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 MOXD1Q6UVY6 613 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 SLC16A10Q8TF71 515 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 DEPDC1BQ8WUY9 529 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 ARHGEF26Q96DR7 871 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 RNF146Q9NTX7 359 aa14.07□□□□□ -0.16
DDX54-201ENST00000306014 HERC5Q9UII4 1024 aaKnown RBP14.07□□□□□ -0.16
DDX54-201ENST00000306014 GTPBP10A4D1E9 387 aaKnown RBP14.06□□□□□ -0.16
DDX54-201ENST00000306014 CES2O00748 559 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 NQO1P15559 274 aaKnown RBP14.06□□□□□ -0.16
DDX54-201ENST00000306014 RPL21P46778 160 aaKnown RBP14.06□□□□□ -0.16
DDX54-201ENST00000306014 ASPHQ12797 758 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 ZNF699Q32M78 642 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 UNC45AQ9H3U1 944 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 KCNH7Q9NS40 1196 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 PCDHB2Q9Y5E7 798 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 MED1Q15648 1581 aaPredicted RBP14.06□□□□□ -0.16
DDX54-201ENST00000306014 NALCNQ8IZF0 1738 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 FAM86B1E9PN63 330 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 ADAMTS3O15072 1205 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 ANP32DO95626 131 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 FAM86B2P0C5J1 330 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 CNGA1P29973 690 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 GARSP41250 739 aaKnown RBP14.06□□□□□ -0.16
DDX54-201ENST00000306014 C1orf146Q5VVC0 180 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 SESTD1Q86VW0 696 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 SLIT3O75094 1523 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 ENO4A6NNW6 628 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 P4HA2O15460 535 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 FGRP09769 529 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 SMAD1Q15797 465 aaKnown RBP14.06□□□□□ -0.16
DDX54-201ENST00000306014 AADACL2Q6P093 401 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 SLC47A2Q86VL8 602 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 WDR75Q8IWA0 830 aaKnown RBP14.06□□□□□ -0.16
DDX54-201ENST00000306014 FUKQ8N0W3 1084 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 CNPY4Q8N129 248 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 ARMC2Q8NEN0 867 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 SPON1Q9HCB6 807 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 TMEM8AQ9HCN3 771 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 ZBTB39O15060 712 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 ZWINTO95229 277 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 ARP10275 920 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 TARSP26639 723 aaKnown RBP14.06□□□□□ -0.16
DDX54-201ENST00000306014 EPHB1P54762 984 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 TPD52P55327 224 aaPredicted RBP14.06□□□□□ -0.16
DDX54-201ENST00000306014 TFDP1Q14186 410 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 GRAMD1BQ3KR37 738 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 RAPH1Q70E73 1250 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 MREGQ8N565 214 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 FBXO28Q9NVF7 368 aa14.06□□□□□ -0.16
DDX54-201ENST00000306014 RGPD8O14715 1765 aaPredicted RBP14.05□□□□□ -0.16
DDX54-201ENST00000306014 NOL3O60936 208 aaKnown RBP14.05□□□□□ -0.16
DDX54-201ENST00000306014 KRT38O76015 456 aa14.05□□□□□ -0.16
DDX54-201ENST00000306014 KRT7P08729 469 aa14.05□□□□□ -0.16
DDX54-201ENST00000306014 BTNL9Q6UXG8 535 aa14.05□□□□□ -0.16
DDX54-201ENST00000306014 SULF1Q8IWU6 871 aa14.05□□□□□ -0.16
DDX54-201ENST00000306014 CD302Q8IX05 232 aa14.05□□□□□ -0.16
DDX54-201ENST00000306014 AGGF1Q8N302 714 aaeCLIP14.05□□□□□ -0.16
DDX54-201ENST00000306014 DNAAF3Q8N9W5 541 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms