RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 KPNB1Q14974 876 aaKnown RBP13.55□□□□□ -0.24
COL3A1-201ENST00000304636 LRRC36Q1X8D7 754 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 CCDC92Q53HC0 331 aaPredicted RBP13.55□□□□□ -0.24
COL3A1-201ENST00000304636 ITPRIPL1Q6GPH6 555 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 LRRC8EQ6NSJ5 796 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 C1orf228Q6PIY5 440 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 MTHFD1LQ6UB35 978 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 KCTD17Q8N5Z5 321 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 TMEM117Q9H0C3 514 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 CCDC134Q9H6E4 229 aa13.55□□□□□ -0.24
COL3A1-201ENST00000304636 ZBTB12Q9Y330 459 aaPredicted RBP13.55□□□□□ -0.24
COL3A1-201ENST00000304636 H3BRJ5 948 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 SASH3O75995 380 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 CYLC2Q14093 348 aaPredicted RBP13.54□□□□□ -0.24
COL3A1-201ENST00000304636 FAM102AQ5T9C2 384 aaPredicted RBP13.54□□□□□ -0.24
COL3A1-201ENST00000304636 C16orf89Q6UX73 402 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 CMTM5Q96DZ9 223 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 FSD1LQ9BXM9 530 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 OSBPL8Q9BZF1 889 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 RGL1Q9NZL6 768 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 ZFATQ9P243 1243 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 DMGDHQ9UI17 866 aaKnown RBP13.54□□□□□ -0.24
COL3A1-201ENST00000304636 NAGPAQ9UK23 515 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 AGO2Q9UKV8 859 aaKnown RBP13.54□□□□□ -0.24
COL3A1-201ENST00000304636 ARHGAP26Q9UNA1 814 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 P4HA2O15460 535 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 PTK7Q13308 1070 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 TBCCQ15814 346 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 BTNL9Q6UXG8 535 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 SUGP1Q8IWZ8 645 aaKnown RBP13.54□□□□□ -0.24
COL3A1-201ENST00000304636 MARCH10Q8NA82 808 aaPredicted RBP13.54□□□□□ -0.24
COL3A1-201ENST00000304636 MAGEB18Q96M61 343 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 ZNF341Q9BYN7 854 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 ZNF408Q9H9D4 720 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 DONSONQ9NYP3 566 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 OVOS2A0A0G2JMS6 1433 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 ARHGEF37A1IGU5 675 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 NPEPPSP55786 919 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 ZNF568Q3ZCX4 644 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 RWDD4Q6NW29 188 aaKnown RBP13.54□□□□□ -0.24
COL3A1-201ENST00000304636 DAGLBQ8NCG7 672 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 ARHGEF26Q96DR7 871 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 POLR3FQ9H1D9 316 aaPredicted RBP13.54□□□□□ -0.24
COL3A1-201ENST00000304636 GOLPH3Q9H4A6 298 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 XPO7Q9UIA9 1087 aaKnown RBP13.54□□□□□ -0.24
COL3A1-201ENST00000304636 PTPRUQ92729 1446 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 SLC4A1P02730 911 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 TRIP10Q15642 601 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 CPA5Q8WXQ8 436 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 LACRTQ9GZZ8 138 aa13.54□□□□□ -0.24
COL3A1-201ENST00000304636 AKR1B1P15121 316 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 GRM1Q13255 1194 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 MIGA2Q7L4E1 593 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 RNF139Q8WU17 664 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 TEKT4Q8WW24 435 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 ADAM33Q9BZ11 813 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 EML4Q9HC35 981 aaKnown RBP13.53□□□□□ -0.24
COL3A1-201ENST00000304636 ZC3H7BQ9UGR2 993 aaKnown RBP13.53□□□□□ -0.24
COL3A1-201ENST00000304636 COL15A1P39059 1388 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 A0A087X0T9 212 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 FAM228BP0C875 321 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 UBTFL6P0CB48 400 aaPredicted RBP13.53□□□□□ -0.24
COL3A1-201ENST00000304636 PPARGP37231 505 aaPredicted RBP13.53□□□□□ -0.24
COL3A1-201ENST00000304636 POU5F1BQ06416 359 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 TBX2Q13207 712 aaPredicted RBP13.53□□□□□ -0.24
COL3A1-201ENST00000304636 PIGHQ14442 188 aaPredicted RBP13.53□□□□□ -0.24
COL3A1-201ENST00000304636 CEP55Q53EZ4 464 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 SLC13A5Q86YT5 568 aaPredicted RBP13.53□□□□□ -0.24
COL3A1-201ENST00000304636 CCDC90BQ9GZT6 254 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 C2orf40Q9H1Z8 148 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 KLHL11Q9NVR0 708 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 GABBR1Q9UBS5 961 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 APBA3O96018 575 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 TARSP26639 723 aaKnown RBP13.53□□□□□ -0.24
COL3A1-201ENST00000304636 KCNJ1P48048 391 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 ERFP50548 548 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 ZNF543Q08ER8 600 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 TTI2Q6NXR4 508 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 MAGEB5Q9BZ81 275 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 STAP1Q9ULZ2 295 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 PHTF1Q9UMS5 762 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 TYW5A2RUC4 315 aaKnown RBP13.53□□□□□ -0.24
COL3A1-201ENST00000304636 RPS6KA4O75676 772 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 TOB1P50616 345 aaPredicted RBP13.53□□□□□ -0.24
COL3A1-201ENST00000304636 DNAJC3Q13217 504 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 INPP5AQ14642 412 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 C3orf62Q6ZUJ4 267 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 ANKRD27Q96NW4 1050 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 ZSWIM1Q9BR11 485 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 MTMR4Q9NYA4 1195 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 PAIP2BQ9ULR5 123 aaKnown RBP13.53□□□□□ -0.24
COL3A1-201ENST00000304636 RARGP13631 454 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 NPR1P16066 1061 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 SERPINB3P29508 390 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 CCNA1P78396 465 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 RC3H1Q5TC82 1133 aaKnown RBP13.53□□□□□ -0.24
COL3A1-201ENST00000304636 PKD2L2Q9NZM6 624 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 WDR35Q9P2L0 1181 aa13.53□□□□□ -0.24
COL3A1-201ENST00000304636 KCNN4O15554 427 aa13.52□□□□□ -0.24
COL3A1-201ENST00000304636 SNX2O60749 519 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms