RNA–Protein interactions for RNA: ENST00000303795.8

APLF-201, Transcript of aprataxin and PNKP like factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APLF, Length 3,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-201ENST00000303795 RFX8Q6ZV50 586 aa12.66□□□□□ -0.38
APLF-201ENST00000303795 ZC3H18Q86VM9 953 aaKnown RBP12.66□□□□□ -0.38
APLF-201ENST00000303795 DCAF4Q8WV16 495 aa12.66□□□□□ -0.38
APLF-201ENST00000303795 OTUD5Q96G74 571 aa12.66□□□□□ -0.38
APLF-201ENST00000303795 MAK16Q9BXY0 300 aaKnown RBP12.66□□□□□ -0.38
APLF-201ENST00000303795 NAGPAQ9UK23 515 aa12.66□□□□□ -0.38
APLF-201ENST00000303795 DUOX1Q9NRD9 1551 aa12.66□□□□□ -0.38
APLF-201ENST00000303795 ASAP2O43150 1006 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 PAPOLAP51003 745 aaKnown RBP12.65□□□□□ -0.38
APLF-201ENST00000303795 ALDH5A1P51649 535 aaPredicted RBP12.65□□□□□ -0.38
APLF-201ENST00000303795 DLG4P78352 724 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 LAMB3Q13751 1172 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 TMED2Q15363 201 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 BAP1Q92560 729 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 ANKS1AQ92625 1134 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 CCDC77Q9BR77 488 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 FAM129AQ9BZQ8 928 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 PCMTD2Q9NV79 361 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 YWHABP31946 246 aaKnown RBP12.65□□□□□ -0.38
APLF-201ENST00000303795 ITIH4Q14624 930 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 SGSM1Q2NKQ1 1148 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 ZNF568Q3ZCX4 644 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 PRUNE1Q86TP1 453 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 PPFIBP2Q8ND30 876 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 CRAMP1Q96RY5 1269 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 KLF6Q99612 283 aaPredicted RBP12.65□□□□□ -0.38
APLF-201ENST00000303795 ISCUQ9H1K1 167 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 ZFATQ9P243 1243 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 TRIM33Q9UPN9 1127 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 TTC36A6NLP5 189 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 PFDN1O60925 122 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 NPTXRO95502 500 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 STRIP1Q5VSL9 837 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 TAOK1Q7L7X3 1001 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 SRRM1Q8IYB3 904 aaKnown RBP12.65□□□□□ -0.38
APLF-201ENST00000303795 NEK9Q8TD19 979 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 SCFD2Q8WU76 684 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 FAM20AQ96MK3 541 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 ERGIC2Q96RQ1 377 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 SYT15Q9BQS2 421 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 RAB17Q9H0T7 212 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 CNOT10Q9H9A5 744 aaKnown RBP12.65□□□□□ -0.38
APLF-201ENST00000303795 FAM198AQ9UFP1 575 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 TBC1D30Q9Y2I9 924 aa12.65□□□□□ -0.38
APLF-201ENST00000303795 RPA1P27694 616 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 USP11P51784 963 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 YARSP54577 528 aaKnown RBP12.64□□□□□ -0.39
APLF-201ENST00000303795 ROR2Q01974 943 aaKnown RBP12.64□□□□□ -0.39
APLF-201ENST00000303795 LIN9Q5TKA1 542 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 STMN2Q93045 179 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 NAP1L3Q99457 506 aaPredicted RBP12.64□□□□□ -0.39
APLF-201ENST00000303795 MSTO1Q9BUK6 570 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 STMN4Q9H169 189 aaPredicted RBP12.64□□□□□ -0.39
APLF-201ENST00000303795 OCEL1Q9H607 264 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 WDR35Q9P2L0 1181 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 SPAG7O75391 227 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 EYA4O95677 639 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 WEE2P0C1S8 567 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 NQO1P15559 274 aaKnown RBP12.64□□□□□ -0.39
APLF-201ENST00000303795 GM2AP17900 193 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 MFAP3P55082 362 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 PPATQ06203 517 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 KCNMA1Q12791 1236 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 AP3B2Q13367 1082 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 SMTNL2Q2TAL5 461 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 UBAP2Q5T6F2 1119 aaKnown RBP12.64□□□□□ -0.39
APLF-201ENST00000303795 MICALL2Q8IY33 904 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 OLIG1Q8TAK6 271 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 ATP8B4Q8TF62 1192 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 ABTB1Q969K4 478 aaPredicted RBP12.64□□□□□ -0.39
APLF-201ENST00000303795 NUDCD1Q96RS6 583 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 AKT3Q9Y243 479 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 SGPL1O95470 568 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 PYGBP11216 843 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 CUL1Q13616 776 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 ANKRD20A2Q5SQ80 823 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 PPP1R15BQ5SWA1 713 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 NBPF12Q5TAG4 269 aaPredicted RBP12.64□□□□□ -0.39
APLF-201ENST00000303795 ANKRD20A1Q5TYW2 823 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 ANKRD20A3Q5VUR7 823 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 IL31RAQ8NI17 732 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.64□□□□□ -0.391e-6■■■■■ 56.2
APLF-201ENST00000303795 C10orf88Q9H8K7 445 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 HSPBP1Q9NZL4 362 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 SEPT10Q9P0V9 454 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 NKX1-2Q9UD57 310 aaPredicted RBP12.64□□□□□ -0.39
APLF-201ENST00000303795 MAD1L1Q9Y6D9 718 aa12.64□□□□□ -0.39
APLF-201ENST00000303795 SHANK3Q9BYB0 1731 aa12.63□□□□□ -0.39
APLF-201ENST00000303795 GAS8O95995 478 aa12.63□□□□□ -0.39
APLF-201ENST00000303795 SOX5P35711 763 aa12.63□□□□□ -0.39
APLF-201ENST00000303795 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.39
APLF-201ENST00000303795 BASP1P80723 227 aaKnown RBP12.63□□□□□ -0.39
APLF-201ENST00000303795 SLMAPQ14BN4 828 aa12.63□□□□□ -0.39
APLF-201ENST00000303795 LONRF1Q17RB8 773 aa12.63□□□□□ -0.39
APLF-201ENST00000303795 BBS9Q3SYG4 887 aa12.63□□□□□ -0.39
APLF-201ENST00000303795 CBWD6Q4V339 395 aa12.63□□□□□ -0.39
APLF-201ENST00000303795 CBWD3Q5JTY5 395 aa12.63□□□□□ -0.39
APLF-201ENST00000303795 CBWD5Q5RIA9 395 aa12.63□□□□□ -0.39
APLF-201ENST00000303795 B4GALNT2Q8NHY0 566 aa12.63□□□□□ -0.39
APLF-201ENST00000303795 DTX3LQ8TDB6 740 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms