RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 SMIM5Q71RC9 77 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.7□□□□□ -0.061e-6■■■■□ 24.5
PRKCB-201ENST00000303531 SNX5Q9Y5X3 404 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 PSMD14O00487 310 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 AARSP49588 968 aaKnown RBP eCLIP14.7□□□□□ -0.065e-7■■■■□ 20
PRKCB-201ENST00000303531 URGCPQ8TCY9 931 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 CHD1O14646 1710 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 TBX3O15119 743 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 ITIH2P19823 946 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 C2orf69Q8N8R5 385 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 MMTAG2Q9BU76 263 aaKnown RBP14.7□□□□□ -0.06
PRKCB-201ENST00000303531 SMG5Q9UPR3 1016 aaKnown RBP14.7□□□□□ -0.06
PRKCB-201ENST00000303531 RAD51CO43502 376 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 LBRQ14739 615 aaKnown RBP14.7□□□□□ -0.06
PRKCB-201ENST00000303531 KYAT1Q16773 422 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 EDRF1Q3B7T1 1238 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 ZC2HC1CQ53FD0 456 aaPredicted RBP14.7□□□□□ -0.06
PRKCB-201ENST00000303531 CNTNAP5Q8WYK1 1306 aa14.7□□□□□ -0.06
PRKCB-201ENST00000303531 CSF1RP07333 972 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 PGM1P36871 562 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 KDSRQ06136 332 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 C9orf72Q96LT7 481 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 SPON2Q9BUD6 331 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 PITPNM2Q9BZ72 1349 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 PHF20L1A8MW92 1017 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 OCA2Q04671 838 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 MCEEQ96PE7 176 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 MDH1BQ5I0G3 518 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 CDH16O75309 829 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 APRTP07741 180 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 BTBD8Q5XKL5 378 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 SRLQ86TD4 932 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 A0A1W2PQJ5 194 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 ENO1P06733 434 aaKnown RBP14.69□□□□□ -0.06
PRKCB-201ENST00000303531 PDHBP11177 359 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 MKRN4PQ13434 485 aaPredicted RBP14.69□□□□□ -0.06
PRKCB-201ENST00000303531 RBBP7Q16576 425 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 LRRC8EQ6NSJ5 796 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 C16orf86Q6ZW13 317 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 ZNF34Q8IZ26 560 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 TNIP3Q96KP6 325 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 PPP1R36Q96LQ0 422 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 CCDC90BQ9GZT6 254 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 XKR3Q5GH77 459 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 ANKRD7Q92527 254 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 AGAP1Q9UPQ3 857 aa14.69□□□□□ -0.06
PRKCB-201ENST00000303531 CYP2C19P33261 490 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 SULT1E1P49888 294 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 NCOA4Q13772 614 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 HIC1Q14526 733 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 NPHS2Q9NP85 383 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 NEU2Q9Y3R4 380 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 CDK17Q00537 523 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 C16orf87Q6PH81 154 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 TAS2R42Q7RTR8 314 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 KDELC2Q7Z4H8 507 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 C4orf33Q8N1A6 199 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 RBBP8NLQ8NC74 664 aaPredicted RBP14.68□□□□□ -0.06
PRKCB-201ENST00000303531 SLC24A3Q9HC58 644 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 IFNA8P32881 189 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 TPI1P60174 286 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 CLMNQ96JQ2 1002 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 KCND2Q9NZV8 630 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 MOSPD1Q9UJG1 213 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 PDGFRAP16234 1089 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 RASA1P20936 1047 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 RGS7P49802 495 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 ERFP50548 548 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 PLEKHA5Q9HAU0 1116 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 GRIN1Q05586 938 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 SF3B3Q15393 1217 aaKnown RBP14.68□□□□□ -0.06
PRKCB-201ENST00000303531 JAMLQ86YT9 394 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 TSSK1BQ9BXA7 367 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 KIF17Q9P2E2 1029 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 SETBP1Q9Y6X0 1596 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 POLRMTO00411 1230 aaKnown RBP14.68□□□□□ -0.06
PRKCB-201ENST00000303531 RARS2Q5T160 578 aaKnown RBP14.68□□□□□ -0.06
PRKCB-201ENST00000303531 XPO7Q9UIA9 1087 aaKnown RBP14.68□□□□□ -0.06
PRKCB-201ENST00000303531 AFF2P51816 1311 aa14.68□□□□□ -0.06
PRKCB-201ENST00000303531 BAATQ14032 418 aaPredicted RBP14.67□□□□□ -0.06
PRKCB-201ENST00000303531 AGAP3Q96P47 875 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 RAB6BQ9NRW1 208 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 SLC26A4O43511 780 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 TXNP10599 105 aaKnown RBP14.67□□□□□ -0.06
PRKCB-201ENST00000303531 MAPRE2Q15555 327 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 GRAMD4Q6IC98 578 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 SPATA17Q96L03 361 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 NDFIP2Q9NV92 336 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.67□□□□□ -0.06
PRKCB-201ENST00000303531 NYAP2Q9P242 653 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 PSMC3IPQ9P2W1 217 aaPredicted RBP14.67□□□□□ -0.06
PRKCB-201ENST00000303531 EPAS1Q99814 870 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 FAM118BQ9BPY3 351 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 EML4Q9HC35 981 aaKnown RBP14.67□□□□□ -0.06
PRKCB-201ENST00000303531 ZC3H7BQ9UGR2 993 aaKnown RBP14.67□□□□□ -0.06
PRKCB-201ENST00000303531 AFF4Q9UHB7 1163 aaKnown RBP14.67□□□□□ -0.06
PRKCB-201ENST00000303531 USP15Q9Y4E8 981 aaPredicted RBP14.67□□□□□ -0.06
PRKCB-201ENST00000303531 PPP1R3GB7ZBB8 358 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 ATMINO43313 823 aaPredicted RBP14.67□□□□□ -0.06
PRKCB-201ENST00000303531 TMCC1O94876 653 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms