RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 AK8Q96MA6 479 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 FAM161BQ96MY7 647 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 ZNF197O14709 1029 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 PCNAP12004 261 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 LRRC8AQ8IWT6 810 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 C2orf40Q9H1Z8 148 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 MAGED4Q96JG8 741 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 MID2Q9UJV3 735 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 MYO3BQ8WXR4 1341 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 KRT31Q15323 416 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 MCPH1Q8NEM0 835 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 APPL1Q9UKG1 709 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 TRIM33Q9UPN9 1127 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 TMEM2Q9UHN6 1383 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 MLNP12872 115 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 QARSP47897 775 aaKnown RBP10.47□□□□□ -0.73
TRIM44-201ENST00000299413 TMEM35BQ8NCS4 154 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 RASA4BC9J798 803 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 RASA4O43374 803 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 DDX39BQ13838 428 aaKnown RBP10.47□□□□□ -0.73
TRIM44-201ENST00000299413 DRAP1Q14919 205 aaPredicted RBP10.47□□□□□ -0.73
TRIM44-201ENST00000299413 IER5Q5VY09 327 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.73
TRIM44-201ENST00000299413 XXYLT1Q8NBI6 393 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 GPRC5AQ8NFJ5 357 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 NDE1Q9NXR1 346 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 DNAJC13O75165 2243 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 CUL3Q13618 768 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 GJD4Q96KN9 370 aaPredicted RBP10.47□□□□□ -0.73
TRIM44-201ENST00000299413 CINPQ9BW66 212 aaPredicted RBP10.47□□□□□ -0.73
TRIM44-201ENST00000299413 NMRK2Q9NPI5 230 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 AGAP1Q9UPQ3 857 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 RALBP11234 206 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 STAT5BP51692 787 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 POM121L1PQ3SYA9 428 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 OXER1Q8TDS5 423 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 MRPL28Q13084 256 aaKnown RBP10.47□□□□□ -0.73
TRIM44-201ENST00000299413 LRRC71Q8N4P6 559 aa10.47□□□□□ -0.73
TRIM44-201ENST00000299413 CELF1Q92879 486 aaKnown RBP10.47□□□□□ -0.73
TRIM44-201ENST00000299413 ADAMTS12P58397 1594 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 PP2D1A8MPX8 630 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 CAPN1P07384 714 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 PDIA2Q13087 525 aaKnown RBP10.46□□□□□ -0.73
TRIM44-201ENST00000299413 DOK6Q6PKX4 331 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 RAB23Q9ULC3 237 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 CKBP12277 381 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 TRIM60Q495X7 471 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 IYDQ6PHW0 289 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 IFNEQ86WN2 208 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 MED8Q96G25 268 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 TRIM62Q9BVG3 475 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 ADCY3O60266 1144 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 ZNF560Q96MR9 790 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 CYP2E1P05181 493 aaPredicted RBP10.46□□□□□ -0.73
TRIM44-201ENST00000299413 PITPNM3Q9BZ71 974 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 ARHGEF38Q9NXL2 777 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 FBXO10Q9UK96 956 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 LDHAP00338 332 aaKnown RBP10.46□□□□□ -0.73
TRIM44-201ENST00000299413 NME5P56597 212 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 GOLGA7BQ2TAP0 167 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 DCAF6Q58WW2 860 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 GPT2Q8TD30 523 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.46□□□□□ -0.73
TRIM44-201ENST00000299413 EFCAB6Q5THR3 1501 aa10.46□□□□□ -0.73
TRIM44-201ENST00000299413 CPDO75976 1380 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 CLCN1P35523 988 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 ALCAMQ13740 583 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 RGL4Q8IZJ4 473 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 TMA16Q96EY4 203 aaKnown RBP10.46□□□□□ -0.74
TRIM44-201ENST00000299413 ABCC2Q92887 1545 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 SYT2Q8N9I0 419 aaPredicted RBP10.46□□□□□ -0.74
TRIM44-201ENST00000299413 HPGDP15428 266 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 YWHABP31946 246 aaKnown RBP10.46□□□□□ -0.74
TRIM44-201ENST00000299413 GUCA1AP43080 201 aaPredicted RBP10.46□□□□□ -0.74
TRIM44-201ENST00000299413 SPARCL1Q14515 664 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.46□□□□□ -0.74
TRIM44-201ENST00000299413 MCEEQ96PE7 176 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 MIR1-1HGQ9H1L0 117 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 RWDD2AQ9UIY3 292 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 FKBP9O95302 570 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 HARS2P49590 506 aaKnown RBP10.46□□□□□ -0.74
TRIM44-201ENST00000299413 RCSD1Q6JBY9 416 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 FKBP9P1Q75LS8 142 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 TMEM47Q9BQJ4 181 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 UTP6Q9NYH9 597 aaKnown RBP10.46□□□□□ -0.74
TRIM44-201ENST00000299413 ZNF229Q9UJW7 825 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 EMSYQ7Z589 1322 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 CEP152O94986 1710 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 KRT37O76014 449 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 FGD2Q7Z6J4 655 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 FBXO18Q8NFZ0 1043 aa10.46□□□□□ -0.74
TRIM44-201ENST00000299413 LSG1Q9H089 658 aaKnown RBP10.46□□□□□ -0.74
TRIM44-201ENST00000299413 GYG2O15488 501 aa10.45□□□□□ -0.74
TRIM44-201ENST00000299413 NFICP08651 508 aa10.45□□□□□ -0.74
TRIM44-201ENST00000299413 ITGB6P18564 788 aa10.45□□□□□ -0.74
TRIM44-201ENST00000299413 TCN1P20061 433 aaPredicted RBP10.45□□□□□ -0.74
TRIM44-201ENST00000299413 FEN1P39748 380 aaKnown RBP10.45□□□□□ -0.74
TRIM44-201ENST00000299413 CAMKK1Q8N5S9 505 aa10.45□□□□□ -0.74
TRIM44-201ENST00000299413 PBKQ96KB5 322 aa10.45□□□□□ -0.74
TRIM44-201ENST00000299413 SCOCQ9UIL1 159 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms