RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 SEPT4O43236 478 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 KPNA6O60684 536 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 ATP1A1P05023 1023 aaKnown RBP11.31□□□□□ -0.6
COPS2-201ENST00000299259 TMEM191BP0C7N4 346 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 TNFAIP3P21580 790 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 PDE6CP51160 858 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 NAP1L1P55209 391 aaKnown RBP11.31□□□□□ -0.6
COPS2-201ENST00000299259 GJA9P57773 515 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 ADAM17P78536 824 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 AMPD2Q01433 879 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 KYAT1Q16773 422 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 C7orf31Q8N865 590 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 SLC20A1Q8WUM9 679 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 DHX38Q92620 1227 aaKnown RBP11.31□□□□□ -0.6
COPS2-201ENST00000299259 ELMO3Q96BJ8 720 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 ARID3AQ99856 593 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 AGPAT1Q99943 283 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 ADPGKQ9BRR6 497 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 CARD6Q9BX69 1037 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 UPF3AQ9H1J1 476 aaKnown RBP11.31□□□□□ -0.6
COPS2-201ENST00000299259 ADAMTS10Q9H324 1103 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 CDC23Q9UJX2 597 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 NOCTQ9UK39 431 aaKnown RBP11.31□□□□□ -0.6
COPS2-201ENST00000299259 INTUQ9ULD6 942 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 GINS2Q9Y248 185 aa11.31□□□□□ -0.6
COPS2-201ENST00000299259 C17orf102A2RUQ5 167 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 ENC1O14682 589 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 CYP26A1O43174 497 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 BUB1O43683 1085 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 B4GALT4O60513 344 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 GPR32O75388 356 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 CLTAP09496 248 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 H2AFZP0C0S5 128 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 RARBP10826 455 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 KRT5P13647 590 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 TBXAS1P24557 533 aaPredicted RBP11.3□□□□□ -0.6
COPS2-201ENST00000299259 APLP1P51693 650 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 HIC1Q14526 733 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 DUOXA2Q1HG44 320 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 SPOPLQ6IQ16 392 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 H2AFVQ71UI9 128 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 EFCAB13Q8IY85 973 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 LRRN4CLQ8ND94 238 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 OSMRQ99650 979 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 MTG1Q9BT17 334 aaPredicted RBP11.3□□□□□ -0.6
COPS2-201ENST00000299259 CFHR5Q9BXR6 569 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 SPC25Q9HBM1 224 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 PCNTO95613 3336 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 TREHO43280 583 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 TNNC2P02585 160 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 STAG3L1P0CL83 205 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 GNAT1P11488 350 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 HOXC8P31273 242 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 TFAMQ00059 246 aaKnown RBP11.3□□□□□ -0.6
COPS2-201ENST00000299259 CAP1Q01518 475 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 POU5F1Q01860 360 aaKnown RBP11.3□□□□□ -0.6
COPS2-201ENST00000299259 CUL2Q13617 745 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 PCBP1Q15365 356 aaKnown RBP eCLIP11.3□□□□□ -0.6
COPS2-201ENST00000299259 DCAF4L1Q3SXM0 396 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 GNASQ5JWF2 1037 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 TRAPPC11Q7Z392 1133 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 APBB1IPQ7Z5R6 666 aaPredicted RBP11.3□□□□□ -0.6
COPS2-201ENST00000299259 NOP9Q86U38 636 aaKnown RBP11.3□□□□□ -0.6
COPS2-201ENST00000299259 SLC47A2Q86VL8 602 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 PALB2Q86YC2 1186 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 TMEM192Q8IY95 271 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 RPUSD2Q8IZ73 545 aaKnown RBP11.3□□□□□ -0.6
COPS2-201ENST00000299259 DNAJB3Q8WWF6 145 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 TSC1Q92574 1164 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 ANKRD36BP1Q96IX9 119 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 APOBEC3GQ9HC16 384 aaKnown RBP11.3□□□□□ -0.6
COPS2-201ENST00000299259 HDAC6Q9UBN7 1215 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 JRKLQ9Y4A0 524 aa11.3□□□□□ -0.6
COPS2-201ENST00000299259 NCANO14594 1321 aa11.29□□□□□ -0.6
COPS2-201ENST00000299259 A0A1B0GUA9 196 aa11.29□□□□□ -0.6
COPS2-201ENST00000299259 TMCO5BA8MYB1 307 aa11.29□□□□□ -0.6
COPS2-201ENST00000299259 SGPL1O95470 568 aa11.29□□□□□ -0.6
COPS2-201ENST00000299259 PGK1P00558 417 aa11.29□□□□□ -0.6
COPS2-201ENST00000299259 ASS1P00966 412 aaKnown RBP11.29□□□□□ -0.6
COPS2-201ENST00000299259 PRKAR2AP13861 404 aaKnown RBP11.29□□□□□ -0.6
COPS2-201ENST00000299259 DARSP14868 501 aaKnown RBP11.29□□□□□ -0.6
COPS2-201ENST00000299259 CYP11B1P15538 503 aa11.29□□□□□ -0.6
COPS2-201ENST00000299259 FGFR4P22455 802 aa11.29□□□□□ -0.6
COPS2-201ENST00000299259 CACNB2Q08289 660 aaPredicted RBP11.29□□□□□ -0.6
COPS2-201ENST00000299259 TRIM32Q13049 653 aa11.29□□□□□ -0.6
COPS2-201ENST00000299259 IFI16Q16666 785 aaKnown RBP11.29□□□□□ -0.6
COPS2-201ENST00000299259 WHAMMP3Q1A5X7 153 aa11.29□□□□□ -0.6
COPS2-201ENST00000299259 PAPD7Q5XG87 772 aaKnown RBP11.29□□□□□ -0.6
COPS2-201ENST00000299259 CATSPER4Q7RTX7 472 aa11.29□□□□□ -0.6
COPS2-201ENST00000299259 PCDHGC5Q9Y5F6 944 aa11.29□□□□□ -0.6
COPS2-201ENST00000299259 A0A0A6YYK5 440 aaPredicted RBP11.28□□□□□ -0.6
COPS2-201ENST00000299259 TADA3O75528 432 aa11.28□□□□□ -0.6
COPS2-201ENST00000299259 NFICP08651 508 aa11.28□□□□□ -0.6
COPS2-201ENST00000299259 TMEM253P0C7T8 217 aa11.28□□□□□ -0.6
COPS2-201ENST00000299259 ELNP15502 786 aa11.28□□□□□ -0.6
COPS2-201ENST00000299259 GALCP54803 685 aa11.28□□□□□ -0.6
COPS2-201ENST00000299259 NKX3-2P78367 333 aa11.28□□□□□ -0.6
COPS2-201ENST00000299259 ZNF200P98182 395 aaPredicted RBP11.28□□□□□ -0.6
COPS2-201ENST00000299259 CDR2Q01850 454 aa11.28□□□□□ -0.6
COPS2-201ENST00000299259 NCBP1Q09161 790 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms