RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 EMBQ6PCB8 327 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 CPLX4Q7Z7G2 160 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 NLRP14Q86W24 1093 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 THNSL1Q8IYQ7 743 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 GPD1LQ8N335 351 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 TAB3Q8N5C8 712 aaPredicted RBP10.8□□□□□ -0.68
FOXN4-201ENST00000299162 C11orf70Q9BRQ4 267 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 STRA6Q9BX79 667 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 HOXC10Q9NYD6 342 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 CPSF2Q9P2I0 782 aaKnown RBP10.8□□□□□ -0.68
FOXN4-201ENST00000299162 CNOT8Q9UFF9 292 aaKnown RBP10.8□□□□□ -0.68
FOXN4-201ENST00000299162 ANAPC7Q9UJX3 599 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 UTP11Q9Y3A2 253 aaKnown RBP10.8□□□□□ -0.68
FOXN4-201ENST00000299162 NOP56O00567 594 aaKnown RBP10.8□□□□□ -0.68
FOXN4-201ENST00000299162 CHRNB2P17787 502 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 SLCO1A2P46721 670 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 CYP24A1Q07973 514 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 GRIK3Q13003 919 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 PPP1R7Q15435 360 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 CCDC105Q8IYK2 499 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 ATG4AQ8WYN0 398 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 ACSF2Q96CM8 615 aaPredicted RBP10.8□□□□□ -0.68
FOXN4-201ENST00000299162 TAF1DQ9H5J8 278 aaPredicted RBP10.8□□□□□ -0.68
FOXN4-201ENST00000299162 LRRC4CQ9HCJ2 640 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 RNF181Q9P0P0 153 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 AGO2Q9UKV8 859 aaKnown RBP10.8□□□□□ -0.68
FOXN4-201ENST00000299162 PTPRJQ12913 1337 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 UMODL1Q5DID0 1318 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 DOCK5Q9H7D0 1870 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 ENO4A6NNW6 628 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 FZD9O00144 591 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 DGAT1O75907 488 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 MAPTP10636 758 aaKnown RBP10.8□□□□□ -0.68
FOXN4-201ENST00000299162 ATP4AP20648 1035 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 TNFSF9P41273 254 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 NCKAP1LP55160 1127 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 FMO1Q01740 532 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 WDR44Q5JSH3 913 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 TAS1R3Q7RTX0 852 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 APOBEC3FQ8IUX4 373 aaKnown RBP10.8□□□□□ -0.68
FOXN4-201ENST00000299162 MAP4K3Q8IVH8 894 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 ZNF516Q92618 1163 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 KIFAP3Q92845 792 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 KIF9Q9HAQ2 790 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 ANKEF1Q9NU02 776 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 RBAKQ9NYW8 714 aaPredicted RBP10.8□□□□□ -0.68
FOXN4-201ENST00000299162 TRPC6Q9Y210 931 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 PCDHB4Q9Y5E5 795 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 UBE4BO95155 1302 aa10.8□□□□□ -0.68
FOXN4-201ENST00000299162 COL2A1P02458 1487 aaPredicted RBP10.8□□□□□ -0.68
FOXN4-201ENST00000299162 CLDN3O15551 220 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 COQ9O75208 318 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 KRT19P08727 400 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 PYGMP11217 842 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 DR1Q01658 176 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 SPRED3Q2MJR0 410 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 HIBCHQ6NVY1 386 aaPredicted RBP10.79□□□□□ -0.68
FOXN4-201ENST00000299162 NIPA1Q7RTP0 329 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 SLC9A9Q8IVB4 645 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 FBXO16Q8IX29 292 aaPredicted RBP10.79□□□□□ -0.68
FOXN4-201ENST00000299162 OLIG1Q8TAK6 271 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 GPRASP2Q96D09 838 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 IWS1Q96ST2 819 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 RNF19AQ9NV58 838 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 SUCLA2Q9P2R7 463 aaPredicted RBP10.79□□□□□ -0.68
FOXN4-201ENST00000299162 RNF14Q9UBS8 474 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 G3BP2Q9UN86 482 aaKnown RBP10.79□□□□□ -0.68
FOXN4-201ENST00000299162 GOLGA6L10A0A0M3HER8 536 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 USP2O75604 605 aaPredicted RBP10.79□□□□□ -0.68
FOXN4-201ENST00000299162 HLA-DRAP01903 254 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 SUPT20HL2P0C7V6 817 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 UBA1P22314 1058 aaKnown RBP10.79□□□□□ -0.68
FOXN4-201ENST00000299162 TCF7P36402 384 aaPredicted RBP10.79□□□□□ -0.68
FOXN4-201ENST00000299162 MYO1EQ12965 1108 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 TBC1D25Q3MII6 688 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 SUPT20HL1Q3ZLR7 823 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 TRIM74Q86UV6 250 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 TRIM73Q86UV7 250 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 OR5B17Q8NGF7 314 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 MICAL1Q8TDZ2 1067 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 DCPSQ96C86 337 aaKnown RBP10.79□□□□□ -0.68
FOXN4-201ENST00000299162 CYFIP2Q96F07 1278 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 TMEM8AQ9HCN3 771 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 GDF3Q9NR23 364 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 INO80B-WBP1J3KQ70 363 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 O00370 1275 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 SHOX2O60902 331 aaPredicted RBP10.79□□□□□ -0.68
FOXN4-201ENST00000299162 RTN2O75298 545 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 EDN1P05305 212 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 MUTP22033 750 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 RRM1P23921 792 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 HSD17B3P37058 310 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 TFAMQ00059 246 aaKnown RBP10.79□□□□□ -0.68
FOXN4-201ENST00000299162 PPATQ06203 517 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 KIF22Q14807 665 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 UBAP2Q5T6F2 1119 aaKnown RBP10.79□□□□□ -0.68
FOXN4-201ENST00000299162 KAZNQ674X7 775 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 PRUNE1Q86TP1 453 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 RHPN2Q8IUC4 686 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 MCPH1Q8NEM0 835 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms