RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 CLEC16AQ2KHT3 1053 aa26.04■■□□□ 1.76
SPTSSA-201ENST00000298130 LARGE2Q8N3Y3 721 aa26.04■■□□□ 1.76
SPTSSA-201ENST00000298130 ZNF516Q92618 1163 aa26.04■■□□□ 1.76
SPTSSA-201ENST00000298130 SGSM3Q96HU1 749 aa26.04■■□□□ 1.76
SPTSSA-201ENST00000298130 LRRC19Q9H756 370 aa26.04■■□□□ 1.76
SPTSSA-201ENST00000298130 GABBR1Q9UBS5 961 aa26.04■■□□□ 1.76
SPTSSA-201ENST00000298130 SPDYE2Q495Y8 402 aa26.04■■□□□ 1.76
SPTSSA-201ENST00000298130 PCNX4Q63HM2 1172 aa26.04■■□□□ 1.76
SPTSSA-201ENST00000298130 CYFIP1Q7L576 1253 aa26.04■■□□□ 1.76
SPTSSA-201ENST00000298130 PNMA8AQ86V59 439 aaPredicted RBP26.04■■□□□ 1.76
SPTSSA-201ENST00000298130 UVRAGQ9P2Y5 699 aa26.04■■□□□ 1.76
SPTSSA-201ENST00000298130 CHUKO15111 745 aa26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 MAPTP10636 758 aaKnown RBP26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 RALAP11233 206 aa26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 GPC3P51654 580 aa26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 TCEAL1Q15170 157 aa26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 C11orf70Q9BRQ4 267 aa26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 FSCN2O14926 492 aa26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 ZNF862O60290 1169 aa26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 CLTAP09496 248 aa26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 CD58P19256 250 aa26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 RDXP35241 583 aaKnown RBP26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 ACOT2P49753 483 aa26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 CYP24A1Q07973 514 aa26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 LACTB2Q53H82 288 aaPredicted RBP26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 CNKSR1Q969H4 720 aa26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 THOC1Q96FV9 657 aaKnown RBP26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 KDM4CQ9H3R0 1056 aa26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 BAIAP2L1Q9UHR4 511 aa26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 RIPK3Q9Y572 518 aa26.03■■□□□ 1.76
SPTSSA-201ENST00000298130 NUGGCQ68CJ6 796 aa26.02■■□□□ 1.76
SPTSSA-201ENST00000298130 MAP4K3Q8IVH8 894 aa26.02■■□□□ 1.76
SPTSSA-201ENST00000298130 SYNPO2Q9UMS6 1093 aa26.02■■□□□ 1.76
SPTSSA-201ENST00000298130 THAP12O43422 761 aa26.02■■□□□ 1.76
SPTSSA-201ENST00000298130 ATP13A4Q4VNC1 1196 aa26.02■■□□□ 1.76
SPTSSA-201ENST00000298130 VSTM1Q6UX27 236 aa26.02■■□□□ 1.76
SPTSSA-201ENST00000298130 CAPN12Q6ZSI9 719 aa26.02■■□□□ 1.76
SPTSSA-201ENST00000298130 C4orf19Q8IY42 314 aa26.02■■□□□ 1.76
SPTSSA-201ENST00000298130 MCOLN2Q8IZK6 566 aa26.02■■□□□ 1.76
SPTSSA-201ENST00000298130 KIFAP3Q92845 792 aa26.02■■□□□ 1.76
SPTSSA-201ENST00000298130 IVDP26440 423 aa26.01■■□□□ 1.76
SPTSSA-201ENST00000298130 TAS2R40P59535 323 aa26.01■■□□□ 1.76
SPTSSA-201ENST00000298130 SEZ6Q53EL9 994 aa26.01■■□□□ 1.76
SPTSSA-201ENST00000298130 ARHGEF16Q5VV41 709 aa26.01■■□□□ 1.76
SPTSSA-201ENST00000298130 MRRFQ96E11 262 aaKnown RBP26.01■■□□□ 1.76
SPTSSA-201ENST00000298130 TBC1D22BQ9NU19 505 aa26.01■■□□□ 1.76
SPTSSA-201ENST00000298130 PI4K2BG5E9Z4 385 aa26.01■■□□□ 1.75
SPTSSA-201ENST00000298130 TRPM8Q7Z2W7 1104 aa26.01■■□□□ 1.75
SPTSSA-201ENST00000298130 LOC102724159A0A0B4J2E5 919 aa26.01■■□□□ 1.75
SPTSSA-201ENST00000298130 WDR64B1ANS9 1081 aa26.01■■□□□ 1.75
SPTSSA-201ENST00000298130 ASAP2O43150 1006 aa26.01■■□□□ 1.75
SPTSSA-201ENST00000298130 UBOX5O94941 541 aa26.01■■□□□ 1.75
SPTSSA-201ENST00000298130 TNNI1P19237 187 aa26.01■■□□□ 1.75
SPTSSA-201ENST00000298130 PWP2Q15269 919 aaKnown RBP26.01■■□□□ 1.75
SPTSSA-201ENST00000298130 ZFYVE27Q5T4F4 411 aa26.01■■□□□ 1.75
SPTSSA-201ENST00000298130 KAZNQ674X7 775 aa26.01■■□□□ 1.75
SPTSSA-201ENST00000298130 CYP4F22Q6NT55 531 aa26.01■■□□□ 1.75
SPTSSA-201ENST00000298130 TAOK1Q7L7X3 1001 aa26.01■■□□□ 1.75
SPTSSA-201ENST00000298130 PDCD2LQ9BRP1 358 aa26.01■■□□□ 1.75
SPTSSA-201ENST00000298130 EXOC7Q9UPT5 735 aa26.01■■□□□ 1.75
SPTSSA-201ENST00000298130 SWSAP1Q6NVH7 229 aa26■■□□□ 1.75
SPTSSA-201ENST00000298130 CCDC91Q7Z6B0 441 aa26■■□□□ 1.75
SPTSSA-201ENST00000298130 MORC4Q8TE76 937 aa26■■□□□ 1.75
SPTSSA-201ENST00000298130 ANAPC5Q9UJX4 755 aa26■■□□□ 1.75
SPTSSA-201ENST00000298130 FZD1Q9UP38 647 aa26■■□□□ 1.75
SPTSSA-201ENST00000298130 COQ4Q9Y3A0 265 aa26■■□□□ 1.75
SPTSSA-201ENST00000298130 ASNSP08243 561 aa26■■□□□ 1.75
SPTSSA-201ENST00000298130 MAP2K2P36507 400 aa26■■□□□ 1.75
SPTSSA-201ENST00000298130 ELF3P78545 371 aaPredicted RBP26■■□□□ 1.75
SPTSSA-201ENST00000298130 XRCC4Q13426 336 aa26■■□□□ 1.75
SPTSSA-201ENST00000298130 TNFAIP8L3Q5GJ75 292 aa26■■□□□ 1.75
SPTSSA-201ENST00000298130 SRRM1Q8IYB3 904 aaKnown RBP26■■□□□ 1.75
SPTSSA-201ENST00000298130 KIF2BQ8N4N8 673 aa26■■□□□ 1.75
SPTSSA-201ENST00000298130 VTI1AQ96AJ9 217 aa26■■□□□ 1.75
SPTSSA-201ENST00000298130 ACSF2Q96CM8 615 aaPredicted RBP26■■□□□ 1.75
SPTSSA-201ENST00000298130 SNF8Q96H20 258 aa26■■□□□ 1.75
SPTSSA-201ENST00000298130 DCLK3Q9C098 648 aa26■■□□□ 1.75
SPTSSA-201ENST00000298130 PTPRJQ12913 1337 aa25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 MYPNQ86TC9 1320 aa25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 UNGP13051 313 aaPredicted RBP25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 ATF2P15336 505 aa25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 TCF4P15884 667 aa25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 RHBDF2Q6PJF5 856 aa25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 C12orf50Q8NA57 414 aaPredicted RBP25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 RUNDC3BQ96NL0 473 aa25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 CTDP1Q9Y5B0 961 aaPredicted RBP25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 BRAFP15056 766 aa25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 GBP1P32455 592 aa25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 DSG3P32926 999 aa25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 KCNJ2P63252 427 aa25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 BAATQ14032 418 aaPredicted RBP25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 ZBTB41Q5SVQ8 909 aa25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 GLIS1Q8NBF1 620 aa25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 DDX27Q96GQ7 796 aaKnown RBP25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 ZBTB45Q96K62 511 aaPredicted RBP25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 IWS1Q96ST2 819 aa25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 PAIP2Q9BPZ3 127 aaKnown RBP25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 NINJ2Q9NZG7 142 aa25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 ZNFX1Q9P2E3 1918 aaKnown RBP25.99■■□□□ 1.75
SPTSSA-201ENST00000298130 SNX3O60493 162 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms