RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 CDK17Q00537 523 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 CACNB1Q02641 598 aaPredicted RBP3.32□□□□□ -1.88
HDX-201ENST00000297977 ASIC2Q16515 512 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 HADHQ16836 314 aaKnown RBP3.32□□□□□ -1.88
HDX-201ENST00000297977 ABHD15Q6UXT9 468 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 CCDC170Q8IYT3 715 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 ATL2Q8NHH9 583 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 NPLOC4Q8TAT6 608 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 HNRNPLLQ8WVV9 542 aaKnown RBP3.32□□□□□ -1.88
HDX-201ENST00000297977 PTPN18Q99952 460 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 TSGA10Q9BZW7 698 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 FAM117AQ9C073 453 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 TMEM60Q9H2L4 133 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 KCNMB3Q9NPA1 279 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 PDGFCQ9NRA1 345 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 SPTLC3Q9NUV7 552 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 ZMYM5Q9UJ78 669 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 GABRQQ9UN88 632 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 AGAP1Q9UPQ3 857 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 SCN7AQ01118 1682 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 SF3B1O75533 1304 aaKnown RBP eCLIP3.32□□□□□ -1.88
HDX-201ENST00000297977 SPEF2Q9C093 1822 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 EXTL3O43909 919 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 TACC1O75410 805 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 BAIAP3O94812 1187 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 NPTXRO95502 500 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 EOMESO95936 686 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 CYBAP13498 195 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 RPL9P32969 192 aaKnown RBP3.32□□□□□ -1.88
HDX-201ENST00000297977 NPTX2P47972 431 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 PTENP60484 403 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 CCDC15Q0P6D6 951 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 MTA1Q13330 715 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 MAPK8IP2Q13387 824 aaPredicted RBP3.32□□□□□ -1.88
HDX-201ENST00000297977 MTMR3Q13615 1198 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 MORC3Q14149 939 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 ARL13BQ3SXY8 428 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 PABPC1LQ4VXU2 614 aaKnown RBP3.32□□□□□ -1.88
HDX-201ENST00000297977 MORN1Q5T089 497 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 SFMBT2Q5VUG0 894 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 BTN2A1Q7KYR7 527 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 SIAH1Q8IUQ4 282 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 ZNF557Q8N988 423 aaPredicted RBP3.32□□□□□ -1.88
HDX-201ENST00000297977 IGSF22Q8N9C0 903 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 TEX19Q8NA77 164 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 ACSF2Q96CM8 615 aaPredicted RBP3.32□□□□□ -1.88
HDX-201ENST00000297977 SGSM3Q96HU1 749 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 CCDC77Q9BR77 488 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 TUBGCP2Q9BSJ2 902 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 NIFKQ9BYG3 293 aaKnown RBP3.32□□□□□ -1.88
HDX-201ENST00000297977 PCIF1Q9H4Z3 704 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 THAP9Q9H5L6 903 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 TMEM161AQ9NX61 479 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 TBX20Q9UMR3 447 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 TNFSF13BQ9Y275 285 aa3.32□□□□□ -1.88
HDX-201ENST00000297977 FAM170AA1A519 330 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 CCDC188H7C350 402 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 TRIM66O15016 1216 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 SLC37A4O43826 429 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 ZC3H11AO75152 810 aaKnown RBP eCLIP3.31□□□□□ -1.88
HDX-201ENST00000297977 CYBBP04839 570 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 KCNA2P16389 499 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 ATP2A2P16615 1042 aaKnown RBP3.31□□□□□ -1.88
HDX-201ENST00000297977 EDNRBP24530 442 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 GJA5P36382 358 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 SLC20A2Q08357 652 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 FUT2Q10981 343 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 CCL14Q16627 93 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 WDR72Q3MJ13 1102 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 CCDC38Q502W7 563 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 COBLL1Q53SF7 1204 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 NOMO2Q5JPE7 1267 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 BTBD8Q5XKL5 378 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 MTHFD1LQ6UB35 978 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 TMC6Q7Z403 805 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 SPATA2LQ8IUW3 424 aaPredicted RBP3.31□□□□□ -1.88
HDX-201ENST00000297977 ARHGAP18Q8N392 663 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 MYRIPQ8NFW9 859 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 EMID1Q96A84 441 aaPredicted RBP3.31□□□□□ -1.88
HDX-201ENST00000297977 KIF2CQ99661 725 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 HSD17B14Q9BPX1 270 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 REEP2Q9BRK0 252 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 VPS16Q9H269 839 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 MRPL47Q9HD33 250 aaKnown RBP3.31□□□□□ -1.88
HDX-201ENST00000297977 GTF2IRD1Q9UHL9 959 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 CPSF3Q9UKF6 684 aaKnown RBP3.31□□□□□ -1.88
HDX-201ENST00000297977 PHF24Q9UPV7 400 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 PCDHB4Q9Y5E5 795 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 FRMPD4Q14CM0 1322 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 SFI1A8K8P3 1242 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 KCNJ18B7U540 433 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 CLIC2O15247 247 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 CTDNEP1O95476 244 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 ATP5BP06576 529 aaKnown RBP3.31□□□□□ -1.88
HDX-201ENST00000297977 RECQLP46063 649 aaPredicted RBP3.31□□□□□ -1.88
HDX-201ENST00000297977 LHX1P48742 406 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 VAMP7P51809 220 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 GHRHRQ02643 423 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 ARHGAP1Q07960 439 aa3.31□□□□□ -1.88
HDX-201ENST00000297977 KCNJ12Q14500 433 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms