RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 MLXIPLQ9NP71 852 aa9.96□□□□□ -0.82
PRDM9-201ENST00000296682 ACSL3O95573 720 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 GNA15P30679 374 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 CALCOCO2Q13137 446 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 ALCAMQ13740 583 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 CCDC38Q502W7 563 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 EMBQ6PCB8 327 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 SEPT1Q8WYJ6 367 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 SYT11Q9BT88 431 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 TAF1DQ9H5J8 278 aaPredicted RBP9.95□□□□□ -0.82
PRDM9-201ENST00000296682 TMEM8AQ9HCN3 771 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 ERVK-5Q9HDB9 667 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 RNF14Q9UBS8 474 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 TTC7AQ9ULT0 858 aaPredicted RBP9.95□□□□□ -0.82
PRDM9-201ENST00000296682 PDE4DIPQ5VU43 2346 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 RTN2O75298 545 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 CFHP08603 1231 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 PYGMP11217 842 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 GLRA2P23416 452 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 PRKCIP41743 596 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 IFNAR2P48551 515 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 ALDH5A1P51649 535 aaPredicted RBP9.95□□□□□ -0.82
PRDM9-201ENST00000296682 JAM2P57087 298 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 MAPK6Q16659 721 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 ZNF568Q3ZCX4 644 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 SGO2Q562F6 1265 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 FAM160B1Q5W0V3 765 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 PAXIP1Q6ZW49 1069 aaPredicted RBP9.95□□□□□ -0.82
PRDM9-201ENST00000296682 B4GALNT4Q76KP1 1039 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 ZBTB8OSQ8IWT0 167 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 TBK1Q9UHD2 729 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 UMODL1Q5DID0 1318 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 E7EVH7 732 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 H0YHG0 523 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 FZD9O00144 591 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 PMM2O15305 246 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 ADCY8P40145 1251 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 SEC24CP53992 1094 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 CDH8P55286 799 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 WNT7BP56706 349 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 LACTBP83111 547 aaPredicted RBP9.95□□□□□ -0.82
PRDM9-201ENST00000296682 ENPEPQ07075 957 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 NCOA4Q13772 614 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 WDR72Q3MJ13 1102 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 CCDC137Q6PK04 289 aaKnown RBP9.95□□□□□ -0.82
PRDM9-201ENST00000296682 RHOT2Q8IXI1 618 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 DYDC1Q8WWB3 177 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 PSPC1Q8WXF1 523 aaKnown RBP9.95□□□□□ -0.82
PRDM9-201ENST00000296682 MMP19Q99542 508 aa9.95□□□□□ -0.82
PRDM9-201ENST00000296682 SUCLA2Q9P2R7 463 aaPredicted RBP9.95□□□□□ -0.82
PRDM9-201ENST00000296682 RPS6KA5O75582 802 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 BRD2P25440 801 aaKnown RBP9.94□□□□□ -0.82
PRDM9-201ENST00000296682 PSMC4P43686 418 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 RAP1GAPP47736 663 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 CYP4A22Q5TCH4 519 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 EMC10Q5UCC4 262 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 SLC39A4Q6P5W5 647 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 NIPA1Q7RTP0 329 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 EIF1ADQ8N9N8 165 aaKnown RBP9.94□□□□□ -0.82
PRDM9-201ENST00000296682 OPTNQ96CV9 577 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 FMO2Q99518 471 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 GINM1Q9NU53 330 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 PCSK1NQ9UHG2 260 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 RASAL2Q9UJF2 1139 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 B4GALT5O43286 388 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 MYL6P60660 151 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 ATP13A4Q4VNC1 1196 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 MAP4K3Q8IVH8 894 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 NLRP7Q8WX94 980 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 LRRC45Q96CN5 670 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 NAP1L3Q99457 506 aaPredicted RBP9.94□□□□□ -0.82
PRDM9-201ENST00000296682 NEUROG2Q9H2A3 272 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 ZWILCHQ9H900 591 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 TXNRD2Q9NNW7 524 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 KCNK9Q9NPC2 374 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 PPP1R37O75864 691 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 CST3P01034 146 aaPredicted RBP9.94□□□□□ -0.82
PRDM9-201ENST00000296682 VTNP04004 478 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 MAPTP10636 758 aaKnown RBP9.94□□□□□ -0.82
PRDM9-201ENST00000296682 NOP14P78316 857 aaKnown RBP9.94□□□□□ -0.82
PRDM9-201ENST00000296682 MYBPC2Q14324 1141 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 NEDD9Q14511 834 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 CYP4F22Q6NT55 531 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 EFCAB12Q6NXP0 572 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 ABHD15Q6UXT9 468 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 GPC2Q8N158 579 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 AENQ8WTP8 325 aaKnown RBP9.94□□□□□ -0.82
PRDM9-201ENST00000296682 AFG3L2Q9Y4W6 797 aa9.94□□□□□ -0.82
PRDM9-201ENST00000296682 AGPSO00116 658 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 TRIM66O15016 1216 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 TLR3O15455 904 aaKnown RBP9.93□□□□□ -0.82
PRDM9-201ENST00000296682 ZNF286BP0CG31 522 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 KRT10P13645 584 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 RWDD2BP57060 319 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 FMO1Q01740 532 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 CDO1Q16878 200 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 SMTNL2Q2TAL5 461 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 C1orf220Q5T0J3 134 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 LIN9Q5TKA1 542 aa9.93□□□□□ -0.82
PRDM9-201ENST00000296682 ZNF365Q70YC5 407 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms