RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 MKNK1Q9BUB5 465 aa11.62□□□□□ -0.55
PBRM1-201ENST00000296302 MRPL1Q9BYD6 325 aaKnown RBP11.62□□□□□ -0.55
PBRM1-201ENST00000296302 ZC3H7BQ9UGR2 993 aaKnown RBP11.62□□□□□ -0.55
PBRM1-201ENST00000296302 SYF2O95926 243 aaKnown RBP11.62□□□□□ -0.55
PBRM1-201ENST00000296302 SNRPAP09012 282 aaKnown RBP11.62□□□□□ -0.55
PBRM1-201ENST00000296302 TMED10P49755 219 aaKnown RBP11.62□□□□□ -0.55
PBRM1-201ENST00000296302 KLK7P49862 253 aa11.62□□□□□ -0.55
PBRM1-201ENST00000296302 DSG1Q02413 1049 aa11.62□□□□□ -0.55
PBRM1-201ENST00000296302 MAPK7Q13164 816 aa11.62□□□□□ -0.55
PBRM1-201ENST00000296302 PTK7Q13308 1070 aa11.62□□□□□ -0.55
PBRM1-201ENST00000296302 FASTKD1Q53R41 847 aaKnown RBP11.62□□□□□ -0.55
PBRM1-201ENST00000296302 SLC27A3Q5K4L6 730 aa11.62□□□□□ -0.55
PBRM1-201ENST00000296302 KLHDC7AQ5VTJ3 777 aa11.62□□□□□ -0.55
PBRM1-201ENST00000296302 RWDD4Q6NW29 188 aaKnown RBP11.62□□□□□ -0.55
PBRM1-201ENST00000296302 TPCN2Q8NHX9 752 aa11.62□□□□□ -0.55
PBRM1-201ENST00000296302 NLRP4Q96MN2 994 aa11.62□□□□□ -0.55
PBRM1-201ENST00000296302 DDX28Q9NUL7 540 aaKnown RBP11.62□□□□□ -0.55
PBRM1-201ENST00000296302 GH2P01242 217 aa11.62□□□□□ -0.55
PBRM1-201ENST00000296302 NMT1P30419 496 aaKnown RBP11.62□□□□□ -0.55
PBRM1-201ENST00000296302 MRPS15P82914 257 aaKnown RBP11.62□□□□□ -0.55
PBRM1-201ENST00000296302 FAM102AQ5T9C2 384 aaPredicted RBP11.62□□□□□ -0.55
PBRM1-201ENST00000296302 DCLRE1BQ9H816 532 aa11.62□□□□□ -0.55
PBRM1-201ENST00000296302 AURKCQ9UQB9 309 aa11.62□□□□□ -0.55
PBRM1-201ENST00000296302 TBX3O15119 743 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 SLC9A1P19634 815 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 ERFP50548 548 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 ABCE1P61221 599 aaKnown RBP11.61□□□□□ -0.55
PBRM1-201ENST00000296302 CAPRIN1Q14444 709 aaKnown RBP11.61□□□□□ -0.55
PBRM1-201ENST00000296302 FRA10AC1Q70Z53 315 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 USP6NLQ92738 828 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 ARHGEF26Q96DR7 871 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 MAGEB18Q96M61 343 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 CCT7Q99832 543 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 WDR35Q9P2L0 1181 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 SNAP23O00161 211 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 NLRP11P59045 1033 aaKnown RBP11.61□□□□□ -0.55
PBRM1-201ENST00000296302 CDC26Q8NHZ8 85 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 KCND2Q9NZV8 630 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 KIF17Q9P2E2 1029 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 LZTS1Q9Y250 596 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 LMTK3Q96Q04 1460 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 AP3B1O00203 1094 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 CCNA1P78396 465 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 GRM1Q13255 1194 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 ADRM1Q16186 407 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 SLC44A4Q53GD3 710 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 C1orf228Q6PIY5 440 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 KRT27Q7Z3Y8 459 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 PRUNE1Q86TP1 453 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 DDI1Q8WTU0 396 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 RMDN3Q96TC7 470 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 PLA2G12BQ9BX93 195 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 HPS5Q9UPZ3 1129 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 ANGPT2O15123 496 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 P4HA2O15460 535 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 SEC24DO94855 1032 aaPredicted RBP11.61□□□□□ -0.55
PBRM1-201ENST00000296302 NPR1P16066 1061 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 IFNA8P32881 189 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 DAB2P98082 770 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 MAP3K10Q02779 954 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 DNAJC3Q13217 504 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 RCN1Q15293 331 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 ZCWPW2Q504Y3 356 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 C12orf60Q5U649 245 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 KCTD17Q8N5Z5 321 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 C2orf40Q9H1Z8 148 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 DBNDD1Q9H9R9 158 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 KIF9Q9HAQ2 790 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 RBAKQ9NYW8 714 aaPredicted RBP11.61□□□□□ -0.55
PBRM1-201ENST00000296302 SEPT3Q9UH03 358 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 XPO7Q9UIA9 1087 aaKnown RBP11.61□□□□□ -0.55
PBRM1-201ENST00000296302 FEM1BQ9UK73 627 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 SLC13A4Q9UKG4 626 aa11.61□□□□□ -0.55
PBRM1-201ENST00000296302 FNDC3AQ9Y2H6 1198 aaKnown RBP11.61□□□□□ -0.55
PBRM1-201ENST00000296302 TMEM247A6NEH6 219 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 KRT8P05787 483 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 ASNSP08243 561 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 ENO3P13929 434 aaPredicted RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 XPAP23025 273 aaPredicted RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 TARSP26639 723 aaKnown RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 PIGHQ14442 188 aaPredicted RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 ZNF568Q3ZCX4 644 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 TMCO5AQ8N6Q1 288 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 MARCOQ9UEW3 520 aaPredicted RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 TEKT2Q9UIF3 430 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 TFR2Q9UP52 801 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 TAF6LQ9Y6J9 622 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 PRAMEP78395 509 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 SLC20A2Q08357 652 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 EFHC2Q5JST6 749 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 RC3H1Q5TC82 1133 aaKnown RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 PRPF39Q86UA1 669 aaKnown RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 ACTRT1Q8TDG2 376 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 E2F7Q96AV8 911 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 LBHD1Q9BQE6 289 aaPredicted RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 REEP2Q9BRK0 252 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 DHX35Q9H5Z1 703 aaKnown RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 CHCHD3Q9NX63 227 aaKnown RBP11.6□□□□□ -0.55
PBRM1-201ENST00000296302 HSPBP1Q9NZL4 362 aa11.6□□□□□ -0.55
PBRM1-201ENST00000296302 PHTF1Q9UMS5 762 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms