RNA–Protein interactions for RNA: ENST00000295628.3

LRRC58-201, Transcript of leucine rich repeat containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC58, Length 7,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58-201ENST00000295628 ARF5P84085 180 aa17.61■□□□□ 0.41
LRRC58-201ENST00000295628 BTBD8Q5XKL5 378 aa17.61■□□□□ 0.41
LRRC58-201ENST00000295628 EXD1Q8NHP7 514 aa17.61■□□□□ 0.41
LRRC58-201ENST00000295628 CAAP1Q9H8G2 361 aa17.61■□□□□ 0.41
LRRC58-201ENST00000295628 ARHGEF38Q9NXL2 777 aa17.61■□□□□ 0.41
LRRC58-201ENST00000295628 XPO7Q9UIA9 1087 aaKnown RBP17.61■□□□□ 0.41
LRRC58-201ENST00000295628 SRPRBQ9Y5M8 271 aaKnown RBP17.61■□□□□ 0.41
LRRC58-201ENST00000295628 USP17L3A6NCW0 530 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 USP17L4A6NCW7 530 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 RSPH10B2B2RC85 870 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 RSPH10BP0C881 870 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 TRIM49P0CI25 452 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 TRIM49CP0CI26 452 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 USP17L1Q7RTZ2 530 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 COMMD2Q86X83 199 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 PTPRN2Q92932 1015 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 TSEN34Q9BSV6 310 aaKnown RBP17.6■□□□□ 0.41
LRRC58-201ENST00000295628 POLG2Q9UHN1 485 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 LCMT1Q9UIC8 334 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 PHKA2P46019 1235 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 ZNF786Q8N393 782 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 USP21Q9UK80 565 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 PEX1O43933 1283 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 MZF1P28698 734 aaPredicted RBP17.6■□□□□ 0.41
LRRC58-201ENST00000295628 KIF2CQ99661 725 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 PCMTD2Q9NV79 361 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 ZMYND8Q9ULU4 1186 aaPredicted RBP17.6■□□□□ 0.41
LRRC58-201ENST00000295628 KLHL17Q6TDP4 642 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 GREM2Q9H772 168 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 PARVAQ9NVD7 372 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 MAP3K19Q56UN5 1328 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 TRIM49BA6NDI0 452 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 CCNE1P24864 410 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 NLRP11P59045 1033 aaKnown RBP17.6■□□□□ 0.41
LRRC58-201ENST00000295628 CCDC17Q96LX7 622 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 SEMA3EO15041 775 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 MTRF1O75570 445 aaKnown RBP17.6■□□□□ 0.41
LRRC58-201ENST00000295628 VAMP7P51809 220 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 CDC16Q13042 620 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 TRIM62Q9BVG3 475 aa17.6■□□□□ 0.41
LRRC58-201ENST00000295628 DDX47Q9H0S4 455 aaKnown RBP17.6■□□□□ 0.41
LRRC58-201ENST00000295628 DBR1Q9UK59 544 aaKnown RBP17.6■□□□□ 0.41
LRRC58-201ENST00000295628 ABCB11O95342 1321 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 PGK2P07205 417 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 SLC44A2Q8IWA5 706 aaPredicted RBP17.59■□□□□ 0.41
LRRC58-201ENST00000295628 TRABDQ9H4I3 376 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 CHMP2BQ9UQN3 213 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 LRRIQ3A6PVS8 624 aaPredicted RBP17.59■□□□□ 0.41
LRRC58-201ENST00000295628 AASDHQ4L235 1098 aaPredicted RBP17.59■□□□□ 0.41
LRRC58-201ENST00000295628 ARMC6Q6NXE6 501 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.59■□□□□ 0.41
LRRC58-201ENST00000295628 DDHD1Q8NEL9 900 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 OLFM1Q99784 485 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 REXO4Q9GZR2 422 aaKnown RBP17.59■□□□□ 0.41
LRRC58-201ENST00000295628 MIF4GDA9UHW6 222 aaKnown RBP17.59■□□□□ 0.41
LRRC58-201ENST00000295628 RC3H1Q5TC82 1133 aaKnown RBP17.59■□□□□ 0.41
LRRC58-201ENST00000295628 NEK10Q6ZWH5 1172 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 CALR3Q96L12 384 aaKnown RBP17.59■□□□□ 0.41
LRRC58-201ENST00000295628 ECSITQ9BQ95 431 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 ATP10DQ9P241 1426 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 SNPHO15079 494 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 RAD17O75943 681 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 GSTM1P09488 218 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 OTOAQ7RTW8 1153 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 CMTM5Q96DZ9 223 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 MS4A14Q96JA4 679 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 DDX50Q9BQ39 737 aaKnown RBP17.59■□□□□ 0.41
LRRC58-201ENST00000295628 SLC16A4O15374 487 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 HMBSP08397 361 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 KIF23Q02241 960 aaPredicted RBP17.59■□□□□ 0.41
LRRC58-201ENST00000295628 DHX36Q9H2U1 1008 aaKnown RBP17.59■□□□□ 0.41
LRRC58-201ENST00000295628 MAP10Q9P2G4 905 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 POTEEQ6S8J3 1075 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 ATP6V1HQ9UI12 483 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 STON1Q9Y6Q2 735 aa17.59■□□□□ 0.41
LRRC58-201ENST00000295628 ALDH1A1P00352 501 aa17.58■□□□□ 0.41
LRRC58-201ENST00000295628 NCF4Q15080 339 aa17.58■□□□□ 0.41
LRRC58-201ENST00000295628 CYFIP1Q7L576 1253 aa17.58■□□□□ 0.41
LRRC58-201ENST00000295628 USP33Q8TEY7 942 aa17.58■□□□□ 0.41
LRRC58-201ENST00000295628 URB2Q14146 1524 aaKnown RBP17.58■□□□□ 0.41
LRRC58-201ENST00000295628 CLASP2O75122 1294 aaKnown RBP17.58■□□□□ 0.41
LRRC58-201ENST00000295628 NR3C1P04150 777 aa17.58■□□□□ 0.41
LRRC58-201ENST00000295628 TBXAS1P24557 533 aaPredicted RBP17.58■□□□□ 0.41
LRRC58-201ENST00000295628 TWF1Q12792 350 aa17.58■□□□□ 0.41
LRRC58-201ENST00000295628 DDI2Q5TDH0 399 aa17.58■□□□□ 0.41
LRRC58-201ENST00000295628 ZNF614Q8N883 585 aa17.58■□□□□ 0.41
LRRC58-201ENST00000295628 E9PBE3 544 aa17.58■□□□□ 0.41
LRRC58-201ENST00000295628 TRIP10Q15642 601 aa17.58■□□□□ 0.41
LRRC58-201ENST00000295628 PNMA6FA0A0J9YX94 578 aa17.58■□□□□ 0.4
LRRC58-201ENST00000295628 FAM25AB3EWG3 89 aa17.58■□□□□ 0.4
LRRC58-201ENST00000295628 FAM25CB3EWG5 89 aa17.58■□□□□ 0.4
LRRC58-201ENST00000295628 FAM25GB3EWG6 89 aa17.58■□□□□ 0.4
LRRC58-201ENST00000295628 MKRN4PQ13434 485 aaPredicted RBP17.58■□□□□ 0.4
LRRC58-201ENST00000295628 INAQ16352 499 aa17.58■□□□□ 0.4
LRRC58-201ENST00000295628 SGSM1Q2NKQ1 1148 aa17.58■□□□□ 0.4
LRRC58-201ENST00000295628 ARIH1Q9Y4X5 557 aaPredicted RBP17.58■□□□□ 0.4
LRRC58-201ENST00000295628 LONRF1Q17RB8 773 aa17.58■□□□□ 0.4
LRRC58-201ENST00000295628 DNAL1Q4LDG9 190 aa17.58■□□□□ 0.4
LRRC58-201ENST00000295628 WLSQ5T9L3 541 aa17.58■□□□□ 0.4
LRRC58-201ENST00000295628 ERAP2Q6P179 960 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms