RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 DIS3Q9Y2L1 958 aaKnown RBP10.81□□□□□ -0.68
CLDN1-201ENST00000295522 SPDYE16A6NNV3 312 aaPredicted RBP10.81□□□□□ -0.68
CLDN1-201ENST00000295522 ZWINTO95229 277 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 IFNB1P01574 187 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 NR3C1P04150 777 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 FAM163BP0C2L3 166 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 HSPA6P17066 643 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 CHRNB2P17787 502 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 ADRA1DP25100 572 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 CDK7P50613 346 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 CHRNDQ07001 517 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 KCNA1Q09470 495 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 SLC1A5Q15758 541 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 KCTD21Q4G0X4 260 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 DZIP1Q86YF9 867 aaKnown RBP10.81□□□□□ -0.68
CLDN1-201ENST00000295522 RAB3IL1Q8TBN0 382 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 PYDC1Q8WXC3 89 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 GATA6Q92908 595 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 RBM15Q96T37 977 aaKnown RBP eCLIP10.81□□□□□ -0.68
CLDN1-201ENST00000295522 ACP6Q9NPH0 428 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 LTN1O94822 1766 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 CALUO43852 315 aaPredicted RBP10.81□□□□□ -0.68
CLDN1-201ENST00000295522 EDF1O60869 148 aaKnown RBP10.81□□□□□ -0.68
CLDN1-201ENST00000295522 RNASEH1O60930 286 aaKnown RBP10.81□□□□□ -0.68
CLDN1-201ENST00000295522 KRT4P19013 534 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 AP2B1P63010 937 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 PLCB3Q01970 1234 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 ACVR2BQ13705 512 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 KAZNQ674X7 775 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 TRIM67Q6ZTA4 783 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 RIOK1Q9BRS2 568 aaKnown RBP10.81□□□□□ -0.68
CLDN1-201ENST00000295522 SHCBP1LQ9BZQ2 653 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.81□□□□□ -0.68
CLDN1-201ENST00000295522 MAD2L2Q9UI95 211 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 USTQ9Y2C2 406 aa10.81□□□□□ -0.68
CLDN1-201ENST00000295522 TPD52L2O43399 206 aaKnown RBP10.8□□□□□ -0.68
CLDN1-201ENST00000295522 RPL13P26373 211 aaKnown RBP10.8□□□□□ -0.68
CLDN1-201ENST00000295522 DRG2P55039 364 aaKnown RBP10.8□□□□□ -0.68
CLDN1-201ENST00000295522 DAB2IPQ5VWQ8 1189 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 IZUMO3Q5VZ72 239 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 LRRC6Q86X45 466 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 ANKMY2Q8IV38 441 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 ZNF653Q96CK0 615 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 ECSITQ9BQ95 431 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 DNAJC18Q9H819 358 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 METTL14Q9HCE5 456 aaKnown RBP10.8□□□□□ -0.68
CLDN1-201ENST00000295522 ANKFY1Q9P2R3 1169 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 A0A1W2PPM1 405 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 LPCAT4Q643R3 524 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 RBM44Q6ZP01 1051 aaKnown RBP10.8□□□□□ -0.68
CLDN1-201ENST00000295522 SESTD1Q86VW0 696 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 FAM186BQ8IYM0 893 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 PIGBQ92521 554 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 ZNF75CPQ92670 426 aaPredicted RBP10.8□□□□□ -0.68
CLDN1-201ENST00000295522 DNAJC19Q96DA6 116 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 IFT43Q96FT9 208 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 TMEM109Q9BVC6 243 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 TSPYL2Q9H2G4 693 aaPredicted RBP10.8□□□□□ -0.68
CLDN1-201ENST00000295522 BCAS3Q9H6U6 928 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 CYP4F11Q9HBI6 524 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 UBE2TQ9NPD8 197 aaPredicted RBP10.8□□□□□ -0.68
CLDN1-201ENST00000295522 STX18Q9P2W9 335 aaKnown RBP10.8□□□□□ -0.68
CLDN1-201ENST00000295522 ZNF142P52746 1687 aaPredicted RBP10.8□□□□□ -0.68
CLDN1-201ENST00000295522 TOPAZ1Q8N9V7 1692 aa10.8□□□□□ -0.68
CLDN1-201ENST00000295522 A0A0A6YYK5 440 aaPredicted RBP10.79□□□□□ -0.68
CLDN1-201ENST00000295522 MEI4A8MW99 385 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 MIF4GDA9UHW6 222 aaKnown RBP10.79□□□□□ -0.68
CLDN1-201ENST00000295522 ANPEPP15144 967 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 ADCY7P51828 1080 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 ASPHQ12797 758 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 TRIP10Q15642 601 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 TGFBRAP1Q8WUH2 860 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 C10orf82Q8WW14 230 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 SLC5A5Q92911 643 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 MTBPQ96DY7 904 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 ERLEC1Q96DZ1 483 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 TMEM47Q9BQJ4 181 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 PLVAPQ9BX97 442 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 TYW1Q9NV66 732 aaKnown RBP10.79□□□□□ -0.68
CLDN1-201ENST00000295522 TAS2R1Q9NYW7 299 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 TMOD2Q9NZR1 351 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 SRCAPQ6ZRS2 3230 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 RSPH10B2B2RC85 870 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 BOLA2-SMG1P6H3BVE0 249 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 RSPH10BP0C881 870 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 PRDX5P30044 214 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 HIRAP54198 1017 aaPredicted RBP10.79□□□□□ -0.68
CLDN1-201ENST00000295522 IGBP1P78318 339 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 ZYXQ15942 572 aaKnown RBP10.79□□□□□ -0.68
CLDN1-201ENST00000295522 KNOP1Q1ED39 458 aaKnown RBP10.79□□□□□ -0.68
CLDN1-201ENST00000295522 TBC1D10BQ4KMP7 808 aaPredicted RBP10.79□□□□□ -0.68
CLDN1-201ENST00000295522 C2CD6Q53TS8 623 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 ARHGAP27Q6ZUM4 889 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 CYFIP1Q7L576 1253 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 CCDC110Q8TBZ0 833 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 NUP85Q9BW27 656 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 BRIP1Q9BX63 1249 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 GRIP2Q9C0E4 1043 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 AAASQ9NRG9 546 aa10.79□□□□□ -0.68
CLDN1-201ENST00000295522 IL17RBQ9NRM6 502 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms