RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 SLC25A41Q8N5S1 370 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 SEC16BQ96JE7 1060 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 NDEL1Q9GZM8 345 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 SYTL2Q9HCH5 934 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 PARVAQ9NVD7 372 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 CCDC22O60826 627 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 HSPA1AP0DMV8 641 aaKnown RBP16.98■□□□□ 0.31
SSRP1-202ENST00000293880 HSPA1BP0DMV9 641 aaKnown RBP16.98■□□□□ 0.31
SSRP1-202ENST00000293880 PRDX5P30044 214 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 CCDC81Q6ZN84 652 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.98■□□□□ 0.31
SSRP1-202ENST00000293880 ABT1Q9ULW3 272 aaKnown RBP16.98■□□□□ 0.31
SSRP1-202ENST00000293880 KDM5DQ9BY66 1539 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 ANO9A1A5B4 782 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 ASAP2O43150 1006 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 MYO1DO94832 1006 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 PDAP1Q13442 181 aaKnown RBP16.98■□□□□ 0.31
SSRP1-202ENST00000293880 EPHA10Q5JZY3 1008 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 FAM160B2Q86V87 743 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 SPATA4Q8NEY3 305 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 CENPAP49450 140 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 PWP1Q13610 501 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 FUT11Q495W5 492 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 TBC1D4O60343 1298 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 SLC7A5P2Q9GIP4 190 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 TMEM117Q9H0C3 514 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 RBAKQ9NYW8 714 aaPredicted RBP16.97■□□□□ 0.31
SSRP1-202ENST00000293880 PKD2L2Q9NZM6 624 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 ROBO2Q9HCK4 1378 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 SUPT3HB4E1H0 165 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 PRPF39Q86UA1 669 aaKnown RBP16.97■□□□□ 0.31
SSRP1-202ENST00000293880 GPD1LQ8N335 351 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 KIF12Q96FN5 646 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 ZNF212Q9UDV6 495 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 SRP72O76094 671 aaKnown RBP16.97■□□□□ 0.31
SSRP1-202ENST00000293880 GRIK1P39086 918 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 TNFAIP2Q03169 654 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 FMR1Q06787 632 aaKnown RBP eCLIP16.97■□□□□ 0.313e-7■■■□□ 17.9
SSRP1-202ENST00000293880 NAIF1Q69YI7 327 aaPredicted RBP16.97■□□□□ 0.31
SSRP1-202ENST00000293880 RRM2BQ7LG56 351 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 MCEEQ96PE7 176 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 CELF4Q9BZC1 486 aaKnown RBP16.97■□□□□ 0.31
SSRP1-202ENST00000293880 DHX36Q9H2U1 1008 aaKnown RBP16.97■□□□□ 0.31
SSRP1-202ENST00000293880 NFIBO00712 420 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 GRAP2O75791 330 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 SGO1Q5FBB7 561 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 ARHGEF1Q92888 912 aaKnown RBP16.97■□□□□ 0.31
SSRP1-202ENST00000293880 FAM96AQ9H5X1 160 aa16.97■□□□□ 0.31
SSRP1-202ENST00000293880 PHKA2P46019 1235 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 INPP5AQ14642 412 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 BRINP3Q76B58 766 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 SH3BP5LQ7L8J4 393 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 RIN3Q8TB24 985 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 TDRD3Q9H7E2 651 aaKnown RBP16.96■□□□□ 0.31
SSRP1-202ENST00000293880 H0Y626 953 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 TRMT2AQ8IZ69 625 aaKnown RBP16.96■□□□□ 0.31
SSRP1-202ENST00000293880 PROM2Q8N271 834 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 COG1Q8WTW3 980 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 DTNBP1Q96EV8 351 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 FAM187AA6NFU0 413 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 C21orf2O43822 256 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 LIFRP42702 1097 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 PKN3Q6P5Z2 889 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 SUPT20HL1Q3ZLR7 823 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 DDX53Q86TM3 631 aaKnown RBP16.96■□□□□ 0.31
SSRP1-202ENST00000293880 TASP1Q9H6P5 420 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 ARL2BPQ9Y2Y0 163 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 CHD1O14646 1710 aa16.96■□□□□ 0.31
SSRP1-202ENST00000293880 F8W8V4 182 aa16.96■□□□□ 0.3
SSRP1-202ENST00000293880 ZBTB7AO95365 584 aa16.96■□□□□ 0.3
SSRP1-202ENST00000293880 ATP6V1B1P15313 513 aa16.96■□□□□ 0.3
SSRP1-202ENST00000293880 HMOX2P30519 316 aa16.96■□□□□ 0.3
SSRP1-202ENST00000293880 C11orf96Q7Z7L8 435 aa16.96■□□□□ 0.3
SSRP1-202ENST00000293880 KLHL25Q9H0H3 589 aa16.96■□□□□ 0.3
SSRP1-202ENST00000293880 SYNDIG1Q9H7V2 258 aa16.96■□□□□ 0.3
SSRP1-202ENST00000293880 PLEKHA5Q9HAU0 1116 aa16.96■□□□□ 0.3
SSRP1-202ENST00000293880 UTP6Q9NYH9 597 aaKnown RBP16.96■□□□□ 0.3
SSRP1-202ENST00000293880 USE1Q9NZ43 259 aa16.96■□□□□ 0.3
SSRP1-202ENST00000293880 SNX31Q8N9S9 440 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 MDM1Q8TC05 714 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 EME1Q96AY2 570 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 DLGAP2Q9P1A6 1054 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 IMPDH2P12268 514 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 TARSP26639 723 aaKnown RBP16.95■□□□□ 0.3
SSRP1-202ENST00000293880 IL6STP40189 918 aaPredicted RBP16.95■□□□□ 0.3
SSRP1-202ENST00000293880 PLIN5Q00G26 463 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 CDR2LQ86X02 465 aaPredicted RBP16.95■□□□□ 0.3
SSRP1-202ENST00000293880 ERP27Q96DN0 273 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 CCT8L2Q96SF2 557 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 WWP1Q9H0M0 922 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 OSBPL5Q9H0X9 879 aaPredicted RBP16.95■□□□□ 0.3
SSRP1-202ENST00000293880 RBM12Q9NTZ6 932 aaKnown RBP16.95■□□□□ 0.3
SSRP1-202ENST00000293880 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.95■□□□□ 0.3
SSRP1-202ENST00000293880 AP3B2Q13367 1082 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 SMTNL2Q2TAL5 461 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 MIER2Q8N344 545 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 SPATA33Q96N06 139 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 CAPN10Q9HC96 672 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 RPAP1Q9BWH6 1393 aaPredicted RBP16.95■□□□□ 0.3
SSRP1-202ENST00000293880 CYTH3O43739 400 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms