RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 ARF4P18085 180 aaPredicted RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 ABCB4P21439 1286 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 GTF2IP78347 998 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 EDRF1Q3B7T1 1238 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 ESCO2Q56NI9 601 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 TAS2R42Q7RTR8 314 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 DEPDC4Q8N2C3 294 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 FSTL5Q8N475 847 aaPredicted RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 USHBP1Q8N6Y0 703 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 DNAAF3Q8N9W5 541 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 DDI1Q8WTU0 396 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 PGBD4Q96DM1 585 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 TBATAQ96M53 351 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 HPS4Q9NQG7 708 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 ARHGEF38Q9NXL2 777 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 SEL1LQ9UBV2 794 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 SH3GLB1Q9Y371 365 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 PCDHB3Q9Y5E6 796 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 PCDHA1Q9Y5I3 950 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 SCINQ9Y6U3 715 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 CFLARO15519 480 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 PDGFRBP09619 1106 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 PAK2Q13177 524 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 DSELQ8IZU8 1212 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 CYTH2Q99418 400 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 TRIM15Q9C019 465 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 DPH3P1Q9H4G8 78 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 CAPN11Q9UMQ6 739 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 RUVBL1Q9Y265 456 aaKnown RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 LRCH1Q9Y2L9 728 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 N4BP2Q86UW6 1770 aaPredicted RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 ATP7BP35670 1465 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 NPHP3Q7Z494 1330 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 TMEM265A0A087WTH1 108 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 GOLGA8IPA6NC78 632 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 INO80B-WBP1J3KQ70 363 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 SLC28A2O43868 658 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 PGM3O95394 542 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 UQCRBP14927 111 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 AMD1P17707 334 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 C4BPBP20851 252 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 LRPAP1P30533 357 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 EIF3BP55884 814 aaKnown RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 GNGT1P63211 74 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 PUS10Q3MIT2 529 aaKnown RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 PDCD4Q53EL6 469 aaKnown RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 RC3H1Q5TC82 1133 aaKnown RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 DEF8Q6ZN54 512 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 CATSPER4Q7RTX7 472 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 SIRT2Q8IXJ6 389 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 FRS2Q8WU20 508 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 TEKT3Q9BXF9 490 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 EPS8L2Q9H6S3 715 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 PRMT8Q9NR22 394 aaPredicted RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 TBC1D7Q9P0N9 293 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 TLK1Q9UKI8 766 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 PLEKHG2Q9H7P9 1386 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 CFAP99D6REC4 459 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 CDC40O60508 579 aaKnown RBP eCLIP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 IFNA14P01570 189 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 TP53P04637 393 aaPredicted RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 ADCY8P40145 1251 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 RBBP4Q09028 425 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 KCNB1Q14721 858 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 SNCBQ16143 134 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 KNOP1Q1ED39 458 aaKnown RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 ATG16L1Q676U5 607 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 LRRC74BQ6ZQY2 392 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 C14orf80Q86SX3 495 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 ZNF614Q8N883 585 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 GIPC3Q8TF64 312 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 ECHDC3Q96DC8 303 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 VPS39Q96JC1 886 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 FAM49AQ9H0Q0 323 aaPredicted RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 KLHL31Q9H511 634 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 WDR41Q9HAD4 459 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 PIM2Q9P1W9 311 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 TJP2Q9UDY2 1190 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 NSD2O96028 1365 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 A6NCN8 305 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 F6X3S4 739 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 CEP104O60308 925 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 SUPT3HO75486 399 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 ALOX15P16050 662 aaPredicted RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 TAC1P20366 129 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 SEMA3AQ14563 771 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 FAM133BQ5BKY9 247 aaKnown RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 RABGAP1LQ5R372 815 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 SPATA1Q5VX52 437 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 PHLDB3Q6NSJ2 640 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 MYCT1Q8N699 235 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 RNFT2Q96EX2 444 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 ERO1AQ96HE7 468 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 FUBP3Q96I24 572 aaKnown RBP eCLIP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 THUMPD2Q9BTF0 503 aaKnown RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 YY1AP1Q9H869 796 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 USP29Q9HBJ7 922 aa4.61□□□□□ -1.67
NCOA1-201ENST00000288599 RSL24D1Q9UHA3 163 aaKnown RBP4.61□□□□□ -1.67
NCOA1-201ENST00000288599 STOML2Q9UJZ1 356 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms