RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 SLC35G2Q8TBE7 412 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 INO80BQ9C086 356 aaPredicted RBP10.94□□□□□ -0.66
C9orf43-201ENST00000288462 CDT1Q9H211 546 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 APOBEC3GQ9HC16 384 aaKnown RBP10.94□□□□□ -0.66
C9orf43-201ENST00000288462 ABCB6Q9NP58 842 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 ACP6Q9NPH0 428 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 PACSIN2Q9UNF0 486 aaPredicted RBP10.94□□□□□ -0.66
C9orf43-201ENST00000288462 TULP1O00294 542 aaPredicted RBP10.94□□□□□ -0.66
C9orf43-201ENST00000288462 BUB1BO60566 1050 aaPredicted RBP10.94□□□□□ -0.66
C9orf43-201ENST00000288462 MTA2O94776 668 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 MMEP08473 750 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 CLTAP09496 248 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 IQCF3P0C7M6 154 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 NOP14P78316 857 aaKnown RBP10.94□□□□□ -0.66
C9orf43-201ENST00000288462 PPFIA1Q13136 1202 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 CUL2Q13617 745 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 NCOA4Q13772 614 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 RPS6KA1Q15418 735 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 DGKDQ16760 1214 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 CCDC181Q5TID7 509 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 TAF3Q5VWG9 929 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 RGMBQ6NW40 437 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 C17orf99Q6UX52 265 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 SAPCD2Q86UD0 394 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 NT5DC3Q86UY8 548 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 SPATA4Q8NEY3 305 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 HNRNPLLQ8WVV9 542 aaKnown RBP10.94□□□□□ -0.66
C9orf43-201ENST00000288462 TCHPQ9BT92 498 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 GOLPH3Q9H4A6 298 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 OSGEPQ9NPF4 335 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 FAM53CQ9NYF3 392 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 COG5Q9UP83 839 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 CNTN6Q9UQ52 1028 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 GNEQ9Y223 722 aaKnown RBP10.94□□□□□ -0.66
C9orf43-201ENST00000288462 ASS1P00966 412 aaKnown RBP10.93□□□□□ -0.66
C9orf43-201ENST00000288462 FTLP02792 175 aaPredicted RBP10.93□□□□□ -0.66
C9orf43-201ENST00000288462 KRT5P13647 590 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 TBXAS1P24557 533 aaPredicted RBP10.93□□□□□ -0.66
C9orf43-201ENST00000288462 PAFAH1B1P43034 410 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 VSNL1P62760 191 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 TNFAIP2Q03169 654 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 GRIK4Q16099 956 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 CFAP221Q4G0U5 840 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 MARCH8Q5T0T0 291 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 SMYD5Q6GMV2 418 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 SPOPLQ6IQ16 392 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 ZNF677Q86XU0 584 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 IFNL1Q8IU54 200 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 UBR7Q8N806 425 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 HES6Q96HZ4 224 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 ZNF668Q96K58 619 aaPredicted RBP10.93□□□□□ -0.66
C9orf43-201ENST00000288462 EHD2Q9NZN4 543 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 PASKQ96RG2 1323 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 A0A087WZ62 844 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 A6NJR5 290 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 B4GALT4O60513 344 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 F2P00734 622 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 IGHA2P01877 340 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 ZNF865P0CJ78 1059 aaPredicted RBP10.93□□□□□ -0.66
C9orf43-201ENST00000288462 TMOD1P28289 359 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 C11orf63Q6NUN7 778 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 PEX26Q7Z412 305 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 DAAM2Q86T65 1068 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 RUBCNQ92622 972 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 TAF4BQ92750 862 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 MS4A14Q96JA4 679 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 PBKQ96KB5 322 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 FDXACB1Q9BRP7 624 aaPredicted RBP10.93□□□□□ -0.66
C9orf43-201ENST00000288462 MTMR12Q9C0I1 747 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 SMARCAL1Q9NZC9 954 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 FLRT1Q9NZU1 646 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 AKT3Q9Y243 479 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 NUB1Q9Y5A7 615 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 PCDHB2Q9Y5E7 798 aa10.93□□□□□ -0.66
C9orf43-201ENST00000288462 UMODL1Q5DID0 1318 aa10.92□□□□□ -0.66
C9orf43-201ENST00000288462 ATP8B1O43520 1251 aa10.92□□□□□ -0.66
C9orf43-201ENST00000288462 ZEB2O60315 1214 aa10.92□□□□□ -0.66
C9orf43-201ENST00000288462 SEC31AO94979 1220 aaKnown RBP10.92□□□□□ -0.66
C9orf43-201ENST00000288462 IL18RAPO95256 599 aa10.92□□□□□ -0.66
C9orf43-201ENST00000288462 VTNP04004 478 aa10.92□□□□□ -0.66
C9orf43-201ENST00000288462 CYP1A2P05177 515 aa10.92□□□□□ -0.66
C9orf43-201ENST00000288462 MCF2P10911 925 aa10.92□□□□□ -0.66
C9orf43-201ENST00000288462 BPIFB4P59827 614 aa10.92□□□□□ -0.66
C9orf43-201ENST00000288462 GPC5P78333 572 aa10.92□□□□□ -0.66
C9orf43-201ENST00000288462 POU5F1Q01860 360 aaKnown RBP10.92□□□□□ -0.66
C9orf43-201ENST00000288462 CLEC16AQ2KHT3 1053 aa10.92□□□□□ -0.66
C9orf43-201ENST00000288462 OLFML2BQ68BL8 750 aa10.92□□□□□ -0.66
C9orf43-201ENST00000288462 EFCAB13Q8IY85 973 aa10.92□□□□□ -0.66
C9orf43-201ENST00000288462 PDZD7Q9H5P4 517 aa10.92□□□□□ -0.66
C9orf43-201ENST00000288462 ARFGAP3Q9NP61 516 aa10.92□□□□□ -0.66
C9orf43-201ENST00000288462 GTF3C4Q9UKN8 822 aa10.92□□□□□ -0.66
C9orf43-201ENST00000288462 RRN3P2A6NIE6 340 aa10.91□□□□□ -0.66
C9orf43-201ENST00000288462 GPR25O00155 361 aa10.91□□□□□ -0.66
C9orf43-201ENST00000288462 KCNK3O14649 394 aa10.91□□□□□ -0.66
C9orf43-201ENST00000288462 PHACTR2O75167 634 aa10.91□□□□□ -0.66
C9orf43-201ENST00000288462 TBC1D8O95759 1140 aa10.91□□□□□ -0.66
C9orf43-201ENST00000288462 MCM3P25205 808 aa10.91□□□□□ -0.66
C9orf43-201ENST00000288462 ZNF132P52740 706 aa10.91□□□□□ -0.66
C9orf43-201ENST00000288462 INHBEP58166 350 aa10.91□□□□□ -0.66
C9orf43-201ENST00000288462 DUOXA2Q1HG44 320 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms