RNA–Protein interactions for RNA: ENST00000288197.9

CACNA2D3-201, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-201ENST00000288197 TTC4O95801 387 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 P4HBP07237 508 aaKnown RBP17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 VCAM1P19320 739 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 ITIH2P19823 946 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 DDR1Q08345 913 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 ITIH4Q14624 930 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 DNAJC24Q6P3W2 148 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 DEPTORQ8TB45 409 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 CFAP36Q96G28 342 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 IWS1Q96ST2 819 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 TUFT1Q9NNX1 390 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 PHTF1Q9UMS5 762 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 CES2O00748 559 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 TBX3O15119 743 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 MT-ND3P03897 115 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 ESRRAP11474 423 aaPredicted RBP17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 CNGA1P29973 690 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 RRP1BQ14684 758 aaKnown RBP17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 CDO1Q16878 200 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 CC2D2BQ6DHV5 1058 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 C1orf186Q6ZWK4 172 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 EEPD1Q7L9B9 569 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 RHPN2Q8IUC4 686 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 CCHCR1Q8TD31 782 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 TTC1Q99614 292 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 POLR3CQ9BUI4 534 aaPredicted RBP17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 SLC13A1Q9BZW2 595 aa17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 SAE1Q9UBE0 346 aaPredicted RBP17.07■□□□□ 0.32
CACNA2D3-201ENST00000288197 MMP10P09238 476 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 EPHB2P29323 1055 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 POLGP54098 1239 aaPredicted RBP17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 TFAMQ00059 246 aaKnown RBP17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 CDR2Q01850 454 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 RASIP1Q5U651 963 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 LVRNQ6Q4G3 990 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 ZDHHC24Q6UX98 284 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 EPS8L1Q8TE68 723 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 HSPH1Q92598 858 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 ATP6V0A4Q9HBG4 840 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 OLFML3Q9NRN5 406 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 CPSF2Q9P2I0 782 aaKnown RBP17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 ZBTB12Q9Y330 459 aaPredicted RBP17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 EIF3DO15371 548 aaKnown RBP eCLIP17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 HOXA7P31268 230 aaPredicted RBP17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 NCALDP61601 193 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 KCNT1Q5JUK3 1230 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 C6orf89Q6UWU4 347 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 AEBP2Q6ZN18 517 aaPredicted RBP17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 RASGEF1CQ8N431 466 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 P2RX7Q99572 595 aaKnown RBP17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 R3HDM2Q9Y2K5 976 aaKnown RBP17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 ZHX2Q9Y6X8 837 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 INHBAP08476 426 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 KRT4P19013 534 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 GNA15P30679 374 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 XRCC4Q13426 336 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 BIRC2Q13490 618 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 APOBEC3HQ6NTF7 200 aaKnown RBP17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 RFX6Q8HWS3 928 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 LARGE2Q8N3Y3 721 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 FITM2Q8N6M3 262 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 MKNK1Q9BUB5 465 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 NINJ2Q9NZG7 142 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 NYAP2Q9P242 653 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 GABBR1Q9UBS5 961 aa17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 G3BP2Q9UN86 482 aaKnown RBP17.06■□□□□ 0.32
CACNA2D3-201ENST00000288197 H7C0C1 242 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 CCND1P24385 295 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 ATP5OP48047 213 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 RMDN3Q96TC7 470 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 GTF3C4Q9UKN8 822 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 EDIL3O43854 480 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 DNAJC8O75937 253 aaPredicted RBP17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 ANXA13P27216 316 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 MARSP56192 900 aaKnown RBP17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 CENPUQ71F23 418 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 C3orf20Q8ND61 904 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 GRHL1Q9NZI5 618 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 PPARGC1AQ9UBK2 798 aaKnown RBP17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 ECE2O60344 883 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 IL1R1P14778 569 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 TAF1P21675 1872 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 ALDH1B1P30837 517 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 PKN2Q16513 984 aaKnown RBP17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 CFAP157Q5JU67 520 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 ANKRD20A2Q5SQ80 823 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 ANKRD20A1Q5TYW2 823 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 SWSAP1Q6NVH7 229 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 RHOT1Q8IXI2 618 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 ARMC2Q8NEN0 867 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 CCDC110Q8TBZ0 833 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 TMEM121Q9BTD3 319 aa17.05■□□□□ 0.32
CACNA2D3-201ENST00000288197 KIF1CO43896 1103 aaKnown RBP17.04■□□□□ 0.32
CACNA2D3-201ENST00000288197 MAN1A1P33908 653 aa17.04■□□□□ 0.32
CACNA2D3-201ENST00000288197 KDSRQ06136 332 aa17.04■□□□□ 0.32
CACNA2D3-201ENST00000288197 AP1ARQ63HQ0 302 aa17.04■□□□□ 0.32
CACNA2D3-201ENST00000288197 MTDHQ86UE4 582 aaKnown RBP17.04■□□□□ 0.32
CACNA2D3-201ENST00000288197 CYP4X1Q8N118 509 aa17.04■□□□□ 0.32
CACNA2D3-201ENST00000288197 JDP2Q8WYK2 163 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms