RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 DDX3XO00571 662 aaKnown RBP eCLIP13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 NKRFO15226 690 aaKnown RBP eCLIP13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 HAUS5O94927 633 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 PLS3P13797 630 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 SLC27A3Q5K4L6 730 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 DHX38Q92620 1227 aaKnown RBP13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 VCPKMTQ9H867 229 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 ALG13Q9NP73 1137 aaKnown RBP13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 TOPORSQ9NS56 1045 aaPredicted RBP13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 DONSONQ9NYP3 566 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 TCP11X1B4DZS4 312 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 H0YCG3 227 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 ATP5HO75947 161 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 SREBF1P36956 1147 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 ALCAMQ13740 583 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 CCDC92Q53HC0 331 aaPredicted RBP13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 OLFML2BQ68BL8 750 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 RSBN1LQ6PCB5 846 aaPredicted RBP13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 RGS9BPQ6ZS82 235 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 ACSF2Q96CM8 615 aaPredicted RBP13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 SUCLA2Q9P2R7 463 aaPredicted RBP13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 ZNF70Q9UC06 446 aaPredicted RBP13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 WARS2Q9UGM6 360 aaKnown RBP13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 FIS1Q9Y3D6 152 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 MYO3BQ8WXR4 1341 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 FAM187AA6NFU0 413 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 F5H423 210 aaPredicted RBP13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 F8VZ95 297 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 PIK3R2O00459 728 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 TTC4O95801 387 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 GNA15P30679 374 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 POLR2BP30876 1174 aaKnown RBP13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 HMGCS2P54868 508 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 MYCBPAPQ8TBZ2 947 aa13.3□□□□□ -0.28
SLC6A1-201ENST00000287766 PPP1R11O60927 126 aaPredicted RBP13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 CALCAP01258 141 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 GPS1Q13098 491 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 ERICH1Q86X53 443 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 TRIM11Q96F44 468 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 STAMBPL1Q96FJ0 436 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 TAAR1Q96RJ0 339 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 WNT8AQ9H1J5 351 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 RPAP3Q9H6T3 665 aaPredicted RBP13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 SEPT10Q9P0V9 454 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 DIS3Q9Y2L1 958 aaKnown RBP13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 SETD1AO15047 1707 aaKnown RBP13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 CAND2O75155 1236 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 TMPRSS15P98073 1019 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 DRP2Q13474 957 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 CRYMQ14894 314 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 SLC35G1Q2M3R5 365 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 EPM2AIP1Q7L775 607 aaPredicted RBP13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 SDCCAG3Q96C92 435 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 MXRA8Q9BRK3 442 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 DRC3Q9H069 523 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 CYP4F11Q9HBI6 524 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 NOD2Q9HC29 1040 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 ZC4H2Q9NQZ6 224 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 NDE1Q9NXR1 346 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 NFIBO00712 420 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 PAX7P23759 505 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 JAK3P52333 1124 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 KRT76Q01546 638 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 KCTD6Q8NC69 237 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 EPS8L3Q8TE67 593 aaKnown RBP13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 RNF34Q969K3 372 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 HIC2Q96JB3 615 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 POLR3CQ9BUI4 534 aaPredicted RBP13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 EFHD1Q9BUP0 239 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 ATP6V0A4Q9HBG4 840 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 AIPL1Q9NZN9 384 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 PCDHA10Q9Y5I2 948 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 CSADQ9Y600 493 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 GOLGA8RI6L899 631 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 PSMA2P25787 234 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 DHX34Q14147 1143 aaKnown RBP13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 CBWD6Q4V339 395 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 CBWD3Q5JTY5 395 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 CBWD5Q5RIA9 395 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 IZUMO3Q5VZ72 239 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 ZNF720Q7Z2F6 126 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 CDR2LQ86X02 465 aaPredicted RBP13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 SLC26A7Q8TE54 656 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 PYROXD1Q8WU10 500 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 TEKT4Q8WW24 435 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 KAT5Q92993 513 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 FAM84AQ96KN4 292 aa13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 RBAKQ9NYW8 714 aaPredicted RBP13.29□□□□□ -0.28
SLC6A1-201ENST00000287766 PHF2O75151 1096 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 KCNA3P22001 575 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 PPM1FP49593 454 aaPredicted RBP13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 RPS6P62753 249 aaKnown RBP13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 TTMPQ5BVD1 217 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 COL23A1Q86Y22 540 aaPredicted RBP13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 ANKMY2Q8IV38 441 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 LRRC4BQ9NT99 713 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 TAS2R14Q9NYV8 317 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 KITP10721 976 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 ART3Q13508 389 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 OR6B2Q6IFH4 312 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms